RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), human

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD44-223	ENST00000526553	EPM2AIP1	Q7L775	607 aa	Predicted RBP	6.01	□□□□□ -1.45
CD44-223	ENST00000526553	DENND1C	Q8IV53	801 aa		6.01	□□□□□ -1.45
CD44-223	ENST00000526553	BEND2	Q8NDZ0	799 aa		6.01	□□□□□ -1.45
CD44-223	ENST00000526553	SUPT20H	Q8NEM7	779 aa		6.01	□□□□□ -1.45
CD44-223	ENST00000526553	BRIX1	Q8TDN6	353 aa	Known RBP	6.01	□□□□□ -1.45
CD44-223	ENST00000526553	CGRRF1	Q99675	332 aa		6.01	□□□□□ -1.45
CD44-223	ENST00000526553	VKORC1	Q9BQB6	163 aa		6.01	□□□□□ -1.45
CD44-223	ENST00000526553	IKZF4	Q9H2S9	585 aa		6.01	□□□□□ -1.45
CD44-223	ENST00000526553	TBCCD1	Q9NVR7	557 aa		6.01	□□□□□ -1.45
CD44-223	ENST00000526553	PACSIN3	Q9UKS6	424 aa		6.01	□□□□□ -1.45
CD44-223	ENST00000526553	DMRT1	Q9Y5R6	373 aa		6.01	□□□□□ -1.45
CD44-223	ENST00000526553	EID1	Q9Y6B2	187 aa		6.01	□□□□□ -1.45
CD44-223	ENST00000526553	ZNF785	A8K8V0	405 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553		E7ENX8	843 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	SCGB1D2	O95969	90 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	ANXA11	P50995	505 aa	Known RBP	6	□□□□□ -1.45
CD44-223	ENST00000526553	PSMC1	P62191	440 aa	Known RBP	6	□□□□□ -1.45
CD44-223	ENST00000526553	TAP2	Q03519	686 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	TCF15	Q12870	199 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	PLS1	Q14651	629 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	CCDC157	Q569K6	752 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	EMC10	Q5UCC4	262 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	NXN	Q6DKJ4	435 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	PPP1R3B	Q86XI6	285 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	SLC35G2	Q8TBE7	412 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	MTFMT	Q96DP5	389 aa	Known RBP	6	□□□□□ -1.45
CD44-223	ENST00000526553	SLC35A4	Q96G79	324 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	TAAR9	Q96RI9	348 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	SMO	Q99835	787 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	SIK2	Q9H0K1	926 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	SLAMF7	Q9NQ25	335 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	ANLN	Q9NQW6	1124 aa		6	□□□□□ -1.45
CD44-223	ENST00000526553	VSX1	Q9NZR4	365 aa	Predicted RBP	6	□□□□□ -1.45
CD44-223	ENST00000526553	TES	Q9UGI8	421 aa	Known RBP	6	□□□□□ -1.45
CD44-223	ENST00000526553	MAST3	O60307	1309 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	TRGV11	A0A075B6L2	103 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553		H3BUI4	141 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	PROZ	P22891	400 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	ZNF135	P52742	658 aa	Predicted RBP	5.99	□□□□□ -1.45
CD44-223	ENST00000526553	RPS7	P62081	194 aa	Known RBP	5.99	□□□□□ -1.45
CD44-223	ENST00000526553	FSTL1	Q12841	308 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	TAPT1	Q6NXT6	567 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	TMPRSS9	Q7Z410	1059 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	TCEAL8	Q8IYN2	117 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	CHPF	Q8IZ52	775 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	LNX2	Q8N448	690 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	SH2D3C	Q8N5H7	860 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	CAMKK1	Q8N5S9	505 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	KLHDC4	Q8TBB5	520 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	DDX17	Q92841	729 aa	Known RBP	5.99	□□□□□ -1.45
CD44-223	ENST00000526553	TNPO1	Q92973	898 aa	Known RBP	5.99	□□□□□ -1.45
CD44-223	ENST00000526553	LRGUK	Q96M69	825 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	TRIB1	Q96RU8	372 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	CNPPD1	Q9BV87	410 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	GABBR1	Q9UBS5	961 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	TCEAL9	Q9UHQ7	104 aa		5.99	□□□□□ -1.45
CD44-223	ENST00000526553	EPN1	Q9Y6I3	576 aa	Predicted RBP	5.99	□□□□□ -1.45
CD44-223	ENST00000526553	SUN1	O94901	812 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	GNAI2	P04899	355 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	SEC24C	P53992	1094 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	DYRK1A	Q13627	763 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	HABP2	Q14520	560 aa	Predicted RBP	5.98	□□□□□ -1.45
CD44-223	ENST00000526553	SSH3	Q8TE77	659 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	CAVIN3	Q969G5	261 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	TMEM125	Q96AQ2	219 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	RUNDC1	Q96C34	613 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553		Q96MF0	132 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	AGAP2	Q99490	1192 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	TINAGL1	Q9GZM7	467 aa	Predicted RBP	5.98	□□□□□ -1.45
CD44-223	ENST00000526553	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	5.98	□□□□□ -1.45
CD44-223	ENST00000526553	INTS13	Q9NVM9	706 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	ETAA1	Q9NY74	926 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553	PCDHA1	Q9Y5I3	950 aa		5.98	□□□□□ -1.45
CD44-223	ENST00000526553		A0A088AWK7	358 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	POLRMT	O00411	1230 aa	Known RBP	5.97	□□□□□ -1.45
CD44-223	ENST00000526553	TOR1B	O14657	336 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	UBXN7	O94888	489 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	ESRRB	O95718	433 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	AHSG	P02765	367 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	RAB1A	P62820	205 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	COL10A1	Q03692	680 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	MPP3	Q13368	585 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	HLX	Q14774	488 aa	Predicted RBP	5.97	□□□□□ -1.45
CD44-223	ENST00000526553	LRRC41	Q15345	812 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	CRB2	Q5IJ48	1285 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	PPP1R32	Q7Z5V6	425 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	MAGEB6	Q8N7X4	407 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	PLBD2	Q8NHP8	589 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	POC1B	Q8TC44	478 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	SLC9A6	Q92581	669 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	PTCD3	Q96EY7	689 aa	Known RBP	5.97	□□□□□ -1.45
CD44-223	ENST00000526553	LRIG1	Q96JA1	1093 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	ACO2	Q99798	780 aa	Known RBP	5.97	□□□□□ -1.45
CD44-223	ENST00000526553	SLITRK6	Q9H5Y7	841 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	SARS2	Q9NP81	518 aa	Known RBP	5.97	□□□□□ -1.45
CD44-223	ENST00000526553	CASS4	Q9NQ75	786 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	KCTD5	Q9NXV2	234 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	DMTF1	Q9Y222	760 aa		5.97	□□□□□ -1.45
CD44-223	ENST00000526553	TSPAN6	O43657	245 aa		5.96	□□□□□ -1.46
CD44-223	ENST00000526553	SOAT2	O75908	522 aa		5.96	□□□□□ -1.46

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