RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 H7C4K7 107 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 ADH1AP07327 375 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 CCDC192P0DO97 292 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 RPL17P18621 184 aaKnown RBP13.9□□□□□ -0.19
SMPD1-202ENST00000526280 NDUFV1P49821 464 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 YWHAHQ04917 246 aaPredicted RBP13.9□□□□□ -0.19
SMPD1-202ENST00000526280 TPD52L1Q16890 204 aaPredicted RBP13.9□□□□□ -0.19
SMPD1-202ENST00000526280 WSCD1Q658N2 575 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 KRT39Q6A163 491 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 RSPO2Q6UXX9 243 aaPredicted RBP13.9□□□□□ -0.19
SMPD1-202ENST00000526280 TMEM184AQ6ZMB5 413 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 LIMS2Q7Z4I7 341 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 PPFIBP1Q86W92 1011 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 TRIM59Q8IWR1 403 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 SLC22A17Q8WUG5 538 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 PABPC5Q96DU9 382 aaKnown RBP13.9□□□□□ -0.19
SMPD1-202ENST00000526280 FUCA2Q9BTY2 467 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 DNAJC25Q9H1X3 360 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 THAP9Q9H5L6 903 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 MMRN2Q9H8L6 949 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 SNX9Q9Y5X1 595 aa13.9□□□□□ -0.19
SMPD1-202ENST00000526280 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.89□□□□□ -0.19
SMPD1-202ENST00000526280 SYCE3A1L190 88 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 LINC01565O15544 149 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 ADAM12O43184 909 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 HUS1O60921 280 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 GLP2RO95838 553 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 C1RP00736 705 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 HLA-DRAP01903 254 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 OR1D2P34982 312 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 MXI1P50539 228 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 CLCN4P51793 760 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 RAB33AQ14088 237 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 SKIV2LQ15477 1246 aaKnown RBP13.89□□□□□ -0.19
SMPD1-202ENST00000526280 SOWAHAQ2M3V2 549 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 SGSM1Q2NKQ1 1148 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 WDR72Q3MJ13 1102 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 CTXN3Q4LDR2 81 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 CBWD6Q4V339 395 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 CBWD3Q5JTY5 395 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 CBWD5Q5RIA9 395 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 OVOS1Q6IE37 1185 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 SLC8B1Q6J4K2 584 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 DPH6Q7L8W6 267 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 PDCL2Q8N4E4 241 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 TOP6BLQ8N6T0 577 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 VN1R2Q8NFZ6 395 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 TAS1R2Q8TE23 839 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 TAF4BQ92750 862 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 CNOT6LQ96LI5 555 aaKnown RBP13.89□□□□□ -0.19
SMPD1-202ENST00000526280 OXCT2Q9BYC2 517 aaPredicted RBP13.89□□□□□ -0.19
SMPD1-202ENST00000526280 FBXL5Q9UKA1 691 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 L1RE1Q9UN81 338 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 NFE2L3Q9Y4A8 694 aa13.89□□□□□ -0.19
SMPD1-202ENST00000526280 PMM2O15305 246 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 ASS1P00966 412 aaKnown RBP13.88□□□□□ -0.19
SMPD1-202ENST00000526280 LTBRP36941 435 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 PIK3CAP42336 1068 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 FMO5P49326 533 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 RBM10P98175 930 aaKnown RBP13.88□□□□□ -0.19
SMPD1-202ENST00000526280 ZNF699Q32M78 642 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 ZSCAN23Q3MJ62 389 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 ANO6Q4KMQ2 910 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 ZNF280DQ6N043 979 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 LILRA6Q6PI73 481 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 METTL23Q86XA0 190 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 PALB2Q86YC2 1186 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 GLYCTKQ8IVS8 523 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 FAM114A1Q8IWE2 563 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 TMEM86AQ8N2M4 240 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 FBXL13Q8NEE6 735 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 SPATA18Q8TC71 538 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 MMS19Q96T76 1030 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 RTP3Q9BQQ7 232 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 SAMSN1Q9NSI8 373 aaKnown RBP13.88□□□□□ -0.19
SMPD1-202ENST00000526280 CLDND1Q9NY35 253 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 COQ4Q9Y3A0 265 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMPD1-202ENST00000526280 HCFC2Q9Y5Z7 792 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 CDY1Q9Y6F8 540 aa13.88□□□□□ -0.19
SMPD1-202ENST00000526280 OR6C75A6NL08 312 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 TGM5O43548 720 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 GLUD1P00367 558 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 FAM163BP0C2L3 166 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 EPCAMP16422 314 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 TNNC1P63316 161 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 KCNH2Q12809 1159 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 ZNF667Q5HYK9 610 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 LLGL2Q6P1M3 1020 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 CREBRFQ8IUR6 639 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMPD1-202ENST00000526280 THEM5Q8N1Q8 247 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 SEMA4DQ92854 862 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 HLA-CQ95604 372 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 ELMO3Q96BJ8 720 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 BPIFA3Q9BQP9 254 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 PI4K2AQ9BTU6 479 aa13.87□□□□□ -0.19
SMPD1-202ENST00000526280 NAT10Q9H0A0 1025 aaKnown RBP13.87□□□□□ -0.19
SMPD1-202ENST00000526280 UBE2ZQ9H832 354 aaPredicted RBP13.87□□□□□ -0.19
SMPD1-202ENST00000526280 RAB20Q9NX57 234 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms