RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 IL31Q6EBC2 164 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 TERB1Q8NA31 727 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 OR2W6PQ8NHA6 318 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 ZNF668Q96K58 619 aaPredicted RBP14.27□□□□□ -0.12
LRRK1-202ENST00000525284 PAIP1Q9H074 479 aaKnown RBP14.27□□□□□ -0.12
LRRK1-202ENST00000525284 BABAM1Q9NWV8 329 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 SLC30A1Q9Y6M5 507 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 RIMS2Q9UQ26 1411 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 FAM47DPA6NHR8 397 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 NEURL1BA8MQ27 555 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 RBBP4Q09028 425 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 CNTN1Q12860 1018 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 MTFR1Q15390 333 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 CHI3L2Q15782 390 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 CYP51A1Q16850 503 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 PTRHD1Q6GMV3 140 aaKnown RBP14.27□□□□□ -0.12
LRRK1-202ENST00000525284 YAF2Q8IY57 180 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 PGBD3Q8N328 593 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 SLC25A41Q8N5S1 370 aa14.27□□□□□ -0.12
LRRK1-202ENST00000525284 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.27□□□□□ -0.12
LRRK1-202ENST00000525284 EAF2Q96CJ1 260 aaPredicted RBP14.27□□□□□ -0.12
LRRK1-202ENST00000525284 INTS2Q9H0H0 1204 aaKnown RBP14.27□□□□□ -0.12
LRRK1-202ENST00000525284 LGALS16A8MUM7 142 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 CPB1P15086 417 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 CASP1P29466 404 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 SULT1E1P49888 294 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 HSD17B4P51659 736 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 MKRN4PQ13434 485 aaPredicted RBP14.27□□□□□ -0.13
LRRK1-202ENST00000525284 TMC2Q8TDI7 906 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 XPO6Q96QU8 1125 aaKnown RBP14.27□□□□□ -0.13
LRRK1-202ENST00000525284 TRIM51Q9BSJ1 452 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 TRPC7Q9HCX4 862 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 MAGEA10P43363 369 aaPredicted RBP14.27□□□□□ -0.13
LRRK1-202ENST00000525284 GPR1P46091 355 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 DYNLL1P63167 89 aaKnown RBP14.27□□□□□ -0.13
LRRK1-202ENST00000525284 SYTL1Q8IYJ3 562 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 XXYLT1Q8NBI6 393 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 MS4A14Q96JA4 679 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 POLR3AO14802 1390 aaPredicted RBP14.27□□□□□ -0.13
LRRK1-202ENST00000525284 A8MXQ7 604 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 GUCY1B2O75343 617 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 CHRNDQ07001 517 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 DDX39BQ13838 428 aaKnown RBP14.27□□□□□ -0.13
LRRK1-202ENST00000525284 MAPK6Q16659 721 aa14.27□□□□□ -0.13
LRRK1-202ENST00000525284 ZCCHC7Q8N3Z6 543 aaKnown RBP14.27□□□□□ -0.13
LRRK1-202ENST00000525284 YTHDC2Q9H6S0 1430 aaKnown RBP14.27□□□□□ -0.13
LRRK1-202ENST00000525284 KPNA4O00629 521 aaPredicted RBP14.26□□□□□ -0.13
LRRK1-202ENST00000525284 GGPS1O95749 300 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 GCP02774 474 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 COPAP53621 1224 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 URGCPQ8TCY9 931 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 MPP4Q96JB8 637 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 CCDC17Q96LX7 622 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 IL1RAPL1Q9NZN1 696 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 APBA3O96018 575 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 SERPINB5P36952 375 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 C9orf72Q96LT7 481 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 RNPC3Q96LT9 517 aaKnown RBP14.26□□□□□ -0.13
LRRK1-202ENST00000525284 RBM15Q96T37 977 aaKnown RBP eCLIP14.26□□□□□ -0.13
LRRK1-202ENST00000525284 PNKPQ96T60 521 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 PARVAQ9NVD7 372 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 N6AMT1Q9Y5N5 214 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 MAP3K19Q56UN5 1328 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 USP27XA6NNY8 438 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 ZNF185O15231 689 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 SEMA3DO95025 777 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 PCP11498 1178 aaKnown RBP14.26□□□□□ -0.13
LRRK1-202ENST00000525284 AP1S2P56377 157 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 NME5P56597 212 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 C1DQ13901 141 aaKnown RBP14.26□□□□□ -0.13
LRRK1-202ENST00000525284 GLYCTKQ8IVS8 523 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 KIRREL3Q8IZU9 778 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 MANSC1Q9H8J5 431 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 ARHGEF12Q9NZN5 1544 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 AREL1O15033 823 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 RALAP11233 206 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 EIF2S3P41091 472 aaKnown RBP14.26□□□□□ -0.13
LRRK1-202ENST00000525284 VAMP7P51809 220 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 ARMC6Q6NXE6 501 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 ATL2Q8NHH9 583 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 SLC52A2Q9HAB3 445 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.26□□□□□ -0.13
LRRK1-202ENST00000525284 SNUPNO95149 360 aaKnown RBP14.26□□□□□ -0.13
LRRK1-202ENST00000525284 CLPTM1O96005 669 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 WEE2P0C1S8 567 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 TRIM65Q6PJ69 517 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 UTS2BQ765I0 119 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 NACC2Q96BF6 587 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 FAM129BQ96TA1 746 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 RPRD1BQ9NQG5 326 aaKnown RBP14.26□□□□□ -0.13
LRRK1-202ENST00000525284 RAB6BQ9NRW1 208 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 PIK3C2GO75747 1445 aa14.26□□□□□ -0.13
LRRK1-202ENST00000525284 NFICP08651 508 aa14.25□□□□□ -0.13
LRRK1-202ENST00000525284 TBXAS1P24557 533 aaPredicted RBP14.25□□□□□ -0.13
LRRK1-202ENST00000525284 YWHAQP27348 245 aa14.25□□□□□ -0.13
LRRK1-202ENST00000525284 POU4F1Q01851 419 aa14.25□□□□□ -0.13
LRRK1-202ENST00000525284 ADRM1Q16186 407 aa14.25□□□□□ -0.13
LRRK1-202ENST00000525284 ZNF284Q2VY69 593 aa14.25□□□□□ -0.13
LRRK1-202ENST00000525284 SENP7Q9BQF6 1050 aa14.25□□□□□ -0.13
LRRK1-202ENST00000525284 MYO3BQ8WXR4 1341 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms