RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 UVSSAQ2YD98 709 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 LIN9Q5TKA1 542 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 TPGS2Q68CL5 300 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 LMBRD2Q68DH5 695 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-225ENST00000523950 OVOS1Q6IE37 1185 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 DPH6Q7L8W6 267 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 METTL23Q86XA0 190 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 PALB2Q86YC2 1186 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 FAM186BQ8IYM0 893 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 TMEM130Q8N3G9 435 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 KREMEN2Q8NCW0 462 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 ZNF461Q8TAF7 563 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 RIPOR3Q96MK2 946 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 POP1Q99575 1024 aaKnown RBP13.52□□□□□ -0.25
VEGFA-225ENST00000523950 GZF1Q9H116 711 aaPredicted RBP13.52□□□□□ -0.25
VEGFA-225ENST00000523950 NUP62CLQ9H1M0 184 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 SIX4Q9UIU6 781 aa13.52□□□□□ -0.25
VEGFA-225ENST00000523950 LRRIQ3A6PVS8 624 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-225ENST00000523950 SLC16A3O15427 465 aaKnown RBP13.51□□□□□ -0.25
VEGFA-225ENST00000523950 ABLIM3O94929 683 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 MBD3O95983 291 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 POU2F2P09086 479 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 HNRNPA1P09651 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
VEGFA-225ENST00000523950 EPB41P11171 864 aaKnown RBP13.51□□□□□ -0.25
VEGFA-225ENST00000523950 ATICP31939 592 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 VAMP7P51809 220 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 ROR1Q01973 937 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 BFSP1Q12934 665 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 CLUL1Q15846 466 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 CAMK4Q16566 473 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 CCDC149Q6ZUS6 474 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 GPR149Q86SP6 731 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 GLYCTKQ8IVS8 523 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 THEM5Q8N1Q8 247 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 TMEM86AQ8N2M4 240 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 TOP6BLQ8N6T0 577 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 HPDLQ96IR7 371 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 USP15Q9Y4E8 981 aaPredicted RBP13.51□□□□□ -0.25
VEGFA-225ENST00000523950 PRUNE2Q8WUY3 3088 aa13.51□□□□□ -0.25
VEGFA-225ENST00000523950 TCF20Q9UGU0 1960 aaKnown RBP13.51□□□□□ -0.25
VEGFA-225ENST00000523950 DENND4AQ7Z401 1863 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 WDR27A2RRH5 827 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 PPP1R3GB7ZBB8 358 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 ADAM12O43184 909 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 HUS1O60921 280 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 PHACTR2O75167 634 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 ZMYND10O75800 440 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 C4BPAP04003 597 aaKnown RBP13.5□□□□□ -0.25
VEGFA-225ENST00000523950 FAM163BP0C2L3 166 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 IL9P15248 144 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 ATF2P15336 505 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 BMP6P22004 513 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 SMARCB1Q12824 385 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 TRPC3Q13507 836 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 CBX2Q14781 532 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-225ENST00000523950 ZACNQ401N2 412 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 ATAT1Q5SQI0 421 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 RARS2Q5T160 578 aaKnown RBP13.5□□□□□ -0.25
VEGFA-225ENST00000523950 ANKRD40Q6AI12 368 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 ISM2Q6H9L7 571 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 RSPO2Q6UXX9 243 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-225ENST00000523950 PLEKHO2Q8TD55 490 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 ADAMTS19Q8TE59 1207 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 ZNF516Q92618 1163 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 SYAP1Q96A49 352 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-225ENST00000523950 CEP63Q96MT8 703 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 VRTNQ9H8Y1 702 aa13.5□□□□□ -0.25
VEGFA-225ENST00000523950 AFF4Q9UHB7 1163 aaKnown RBP13.5□□□□□ -0.25
VEGFA-225ENST00000523950 TIMM13Q9Y5L4 95 aaPredicted RBP13.5□□□□□ -0.25
VEGFA-225ENST00000523950 SPTBN5Q9NRC6 3674 aaKnown RBP13.5□□□□□ -0.25
VEGFA-225ENST00000523950 C2orf16Q68DN1 1984 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 BIN1O00499 593 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 STX10O60499 249 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 C8AP07357 584 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 CPB1P15086 417 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 CD44P16070 742 aaKnown RBP13.49□□□□□ -0.25
VEGFA-225ENST00000523950 ELF1P32519 619 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 GTF2H1P32780 548 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 PMS1P54277 932 aaKnown RBP13.49□□□□□ -0.25
VEGFA-225ENST00000523950 PAK1Q13153 545 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 GPR17Q13304 367 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 BIRC3Q13489 604 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 PPM1LQ5SGD2 360 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 TDRD10Q5VZ19 366 aaKnown RBP13.49□□□□□ -0.25
VEGFA-225ENST00000523950 TTI2Q6NXR4 508 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 ADHFE1Q8IWW8 467 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 MLKLQ8NB16 471 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 NELFBQ8WX92 580 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 TAF4BQ92750 862 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 UHRF1Q96T88 793 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-225ENST00000523950 PHF7Q9BWX1 381 aaPredicted RBP13.49□□□□□ -0.25
VEGFA-225ENST00000523950 PRKD2Q9BZL6 878 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 METTL14Q9HCE5 456 aaKnown RBP13.49□□□□□ -0.25
VEGFA-225ENST00000523950 HSFX1Q9UBD0 423 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 SNX9Q9Y5X1 595 aa13.49□□□□□ -0.25
VEGFA-225ENST00000523950 CCDC195A0A1B0GUA6 201 aa13.48□□□□□ -0.25
VEGFA-225ENST00000523950 TRIM49BA6NDI0 452 aa13.48□□□□□ -0.25
VEGFA-225ENST00000523950 FGFR1OPO95684 399 aaKnown RBP13.48□□□□□ -0.25
VEGFA-225ENST00000523950 CST3P01034 146 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-225ENST00000523950 LHX1P48742 406 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms