RNA–Protein interactions for RNA: ENST00000522855.5

SKP1-210, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SKP1, Length 802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-210ENST00000522855 TRIM54Q9BYV2 358 aa5.3□□□□□ -1.56
SKP1-210ENST00000522855 UNKQ9C0B0 810 aaKnown RBP5.3□□□□□ -1.56
SKP1-210ENST00000522855 POGKQ9P215 609 aa5.3□□□□□ -1.56
SKP1-210ENST00000522855 SRRDQ9UH36 339 aa5.3□□□□□ -1.56
SKP1-210ENST00000522855 AFF4Q9UHB7 1163 aaKnown RBP5.3□□□□□ -1.56
SKP1-210ENST00000522855 CORO2BQ9UQ03 480 aa5.3□□□□□ -1.56
SKP1-210ENST00000522855 AQRO60306 1485 aaKnown RBP eCLIP5.3□□□□□ -1.563e-6■■□□□ 13.8
SKP1-210ENST00000522855 GRIN2BQ13224 1484 aa5.3□□□□□ -1.56
SKP1-210ENST00000522855 SNAPC4Q5SXM2 1469 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 MAGI1Q96QZ7 1491 aaPredicted RBP5.29□□□□□ -1.56
SKP1-210ENST00000522855 CDHR4A6H8M9 788 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 CAPN14A8MX76 684 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 GOLGA6L6A8MZA4 724 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 PATE3B3GLJ2 98 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 RASA4BC9J798 803 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 TBX3O15119 743 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 RASA4O43374 803 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 AKAP8O43823 692 aaKnown RBP5.29□□□□□ -1.56
SKP1-210ENST00000522855 EIF3JO75822 258 aaKnown RBP5.29□□□□□ -1.56
SKP1-210ENST00000522855 COMTP21964 271 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 NOMO3P69849 1222 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 GORABQ5T7V8 394 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 SRLQ86TD4 932 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 COL23A1Q86Y22 540 aaPredicted RBP5.29□□□□□ -1.56
SKP1-210ENST00000522855 GSPT2Q8IYD1 628 aaKnown RBP5.29□□□□□ -1.56
SKP1-210ENST00000522855 ELOA2Q8IYF1 753 aaPredicted RBP5.29□□□□□ -1.56
SKP1-210ENST00000522855 Q8N1X5 172 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 RNF169Q8NCN4 708 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 ATXN2LQ8WWM7 1075 aaKnown RBP5.29□□□□□ -1.56
SKP1-210ENST00000522855 SCAMP4Q969E2 229 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 MSLNLQ96KJ4 702 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 CCDC138Q96M89 665 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 CPEB1Q9BZB8 566 aaKnown RBP5.29□□□□□ -1.56
SKP1-210ENST00000522855 MYH16Q9H6N6 1097 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 FBXO34Q9NWN3 711 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.29□□□□□ -1.56
SKP1-210ENST00000522855 PADI4Q9UM07 663 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 IQGAP2Q13576 1575 aa5.29□□□□□ -1.56
SKP1-210ENST00000522855 LRRIQ1Q96JM4 1722 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 PNPLA7Q6ZV29 1317 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 PLEKHD1A6NEE1 506 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 ZNF785A8K8V0 405 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 FOXS1O43638 330 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 LDHAP00338 332 aaKnown RBP5.28□□□□□ -1.56
SKP1-210ENST00000522855 ITGB1P05556 798 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 THP07101 528 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 ZKSCAN1P17029 563 aaPredicted RBP5.28□□□□□ -1.56
SKP1-210ENST00000522855 SLC6A4P31645 630 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 PIK3CBP42338 1070 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 ALDH5A1P51649 535 aaPredicted RBP5.28□□□□□ -1.56
SKP1-210ENST00000522855 CASP5P51878 434 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 ARFIP2P53365 341 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 POU6F2P78424 691 aaPredicted RBP5.28□□□□□ -1.56
SKP1-210ENST00000522855 RAB32Q13637 225 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 TOGARAM2Q6ZUX3 1019 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 SGMS1Q86VZ5 419 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 SPICE1Q8N0Z3 855 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 CELF5Q8N6W0 485 aaKnown RBP5.28□□□□□ -1.56
SKP1-210ENST00000522855 TBC1D15Q8TC07 691 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 TBCBQ99426 244 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 P2RX7Q99572 595 aaKnown RBP5.28□□□□□ -1.56
SKP1-210ENST00000522855 SELENOOQ9BVL4 669 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 DPH1Q9BZG8 443 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 GSTO2Q9H4Y5 243 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 GPR35Q9HC97 309 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.28□□□□□ -1.56
SKP1-210ENST00000522855 CEP162Q5TB80 1403 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 CARMIL1Q5VZK9 1371 aa5.28□□□□□ -1.56
SKP1-210ENST00000522855 MYO1CO00159 1063 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 KPNA5O15131 536 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 TBC1D4O60343 1298 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 AGFG2O95081 481 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 IL18RAPO95256 599 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 HDCP19113 662 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 HK1P19367 917 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 PHKA1P46020 1223 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 PRIM2P49643 509 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 ZNF135P52742 658 aaPredicted RBP5.27□□□□□ -1.57
SKP1-210ENST00000522855 SUMO3P55854 103 aaPredicted RBP5.27□□□□□ -1.57
SKP1-210ENST00000522855 PSMC1P62191 440 aaKnown RBP5.27□□□□□ -1.57
SKP1-210ENST00000522855 FMO1Q01740 532 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 PIGFQ07326 219 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 SLC13A2Q13183 592 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 DAG1Q14118 895 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 CEP170Q5SW79 1584 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 UTP14CQ5TAP6 766 aaKnown RBP5.27□□□□□ -1.57
SKP1-210ENST00000522855 LMBRD2Q68DH5 695 aaPredicted RBP5.27□□□□□ -1.57
SKP1-210ENST00000522855 NAIF1Q69YI7 327 aaPredicted RBP5.27□□□□□ -1.57
SKP1-210ENST00000522855 CRIP3Q6Q6R5 217 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 MED25Q71SY5 747 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 OR2C3Q8N628 320 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 PCSK9Q8NBP7 692 aaKnown RBP5.27□□□□□ -1.57
SKP1-210ENST00000522855 NUP133Q8WUM0 1156 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 NMD3Q96D46 503 aaKnown RBP5.27□□□□□ -1.57
SKP1-210ENST00000522855 CNPPD1Q9BV87 410 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 TINAGL1Q9GZM7 467 aaPredicted RBP5.27□□□□□ -1.57
SKP1-210ENST00000522855 KLC2Q9H0B6 622 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 ARFGAP3Q9NP61 516 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 STARD7Q9NQZ5 370 aa5.27□□□□□ -1.57
SKP1-210ENST00000522855 DMTF1Q9Y222 760 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms