RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 TOP1MTQ969P6 601 aa22.86■■□□□ 1.25
R3HCC1-208ENST00000522012 MRPL9Q9BYD2 267 aaKnown RBP22.86■■□□□ 1.25
R3HCC1-208ENST00000522012 SSU72P8A0A1W2PR75 194 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 ZBBXA8MT70 800 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 B4GALT3O60512 393 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 CYLC1P35663 651 aaPredicted RBP22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 OR1G1P47890 313 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 MAPK8IP2Q13387 824 aaPredicted RBP22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 ZNF394Q53GI3 561 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 FAM117BQ6P1L5 589 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 DCLRE1AQ6PJP8 1040 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 ZNF571Q7Z3V5 609 aaPredicted RBP22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 TMCO2Q7Z6W1 182 aaPredicted RBP22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 SLC47A2Q86VL8 602 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 COLGALT2Q8IYK4 626 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 CCDC170Q8IYT3 715 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 C3orf58Q8NDZ4 430 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 ACP6Q9NPH0 428 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 CNTN6Q9UQ52 1028 aa22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 EPN1Q9Y6I3 576 aaPredicted RBP22.85■■□□□ 1.25
R3HCC1-208ENST00000522012 TET1Q8NFU7 2136 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 CYB561D2O14569 222 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 AKR1B10O60218 316 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 HUS1O60921 280 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 DGKIO75912 1065 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 EPHB4P54760 987 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 BPIFB4P59827 614 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 SOWAHAQ2M3V2 549 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 DSTYKQ6XUX3 929 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 APPL2Q8NEU8 664 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 RSPH1Q8WYR4 309 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 LBHD1Q9BQE6 289 aaPredicted RBP22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 MRPL45Q9BRJ2 306 aaKnown RBP22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 NRDE2Q9H7Z3 1164 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 DNAJB4Q9UDY4 337 aa22.84■■□□□ 1.25
R3HCC1-208ENST00000522012 CALCAP01258 141 aa22.83■■□□□ 1.25
R3HCC1-208ENST00000522012 CYP11B1P15538 503 aa22.83■■□□□ 1.25
R3HCC1-208ENST00000522012 TOGARAM2Q6ZUX3 1019 aa22.83■■□□□ 1.25
R3HCC1-208ENST00000522012 TTC39CQ8N584 583 aa22.83■■□□□ 1.25
R3HCC1-208ENST00000522012 HASPINQ8TF76 798 aa22.83■■□□□ 1.25
R3HCC1-208ENST00000522012 NDUFA10O95299 355 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 PDE6CP51160 858 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 KIF11P52732 1056 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 ZNF132P52740 706 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 TAF3Q5VWG9 929 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 NOP9Q86U38 636 aaKnown RBP22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 VPS36Q86VN1 386 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 ZSCAN30Q86W11 494 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 LRRC43Q8N309 656 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 SLC20A1Q8WUM9 679 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 SENP8Q96LD8 212 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 AGPAT1Q99943 283 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 DESI2Q9BSY9 194 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 SPTLC3Q9NUV7 552 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 PUF60Q9UHX1 559 aaKnown RBP22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 BARX2Q9UMQ3 279 aaPredicted RBP22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 L1RE1Q9UN81 338 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 PRG3Q9Y2Y8 225 aaPredicted RBP22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 MKI67P46013 3256 aaKnown RBP22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 CILPO75339 1184 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 KIF4AO95239 1232 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 TNFAIP3P21580 790 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 NDST1P52848 882 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 TIGD5Q53EQ6 642 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 TMEM240Q5SV17 173 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 PSRC1Q6PGN9 363 aaPredicted RBP22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 TOP6BLQ8N6T0 577 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 OR6B3Q8NGW1 331 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 EPS8L1Q8TE68 723 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 FAM124BQ9H5Z6 455 aaPredicted RBP22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 SEPT11Q9NVA2 429 aaKnown RBP22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 HCSTQ9UBK5 93 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 HMGXB4Q9UGU5 601 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 ADAMTS1Q9UHI8 967 aa22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 NOCTQ9UK39 431 aaKnown RBP22.82■■□□□ 1.24
R3HCC1-208ENST00000522012 F8W810 466 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 I3L4J1 428 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 TACC1O75410 805 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 ALDH2P05091 517 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 PAX3P23760 479 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 BRCC3P46736 316 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 GFPT1Q06210 699 aaPredicted RBP22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 INCA1Q0VD86 236 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 ORC1Q13415 861 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 ASTE1Q2TB18 679 aaPredicted RBP22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 SMYD5Q6GMV2 418 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 CD300LGQ6UXG3 332 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 DPH6Q7L8W6 267 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 ADGRF2Q8IZF7 708 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 PDCL2Q8N4E4 241 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 WHAMMQ8TF30 809 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 ELOVL4Q9GZR5 314 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 SNX25Q9H3E2 840 aa22.81■■□□□ 1.24
R3HCC1-208ENST00000522012 EIF3CLB5ME19 914 aaKnown RBP22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 NRP1O14786 923 aa22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 IPO7O95373 1038 aaKnown RBP22.8■■□□□ 1.24
R3HCC1-208ENST00000522012 ITGB1P05556 798 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms