RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 PSPC1Q8WXF1 523 aaKnown RBP6.57□□□□□ -1.36
SPIDR-216ENST00000521918 P2RX5Q93086 422 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 TMEM143Q96AN5 459 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 MRPL38Q96DV4 380 aaKnown RBP6.57□□□□□ -1.36
SPIDR-216ENST00000521918 CASD1Q96PB1 797 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 FANCD2OSQ96PS1 177 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 MMTAG2Q9BU76 263 aaKnown RBP6.57□□□□□ -1.36
SPIDR-216ENST00000521918 GCOM2Q9BZD3 368 aaPredicted RBP6.57□□□□□ -1.36
SPIDR-216ENST00000521918 CWH43Q9H720 699 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 ATP6V0A4Q9HBG4 840 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 CHST12Q9NRB3 414 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 FAM105AQ9NUU6 356 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 THEGQ9P2T0 379 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 DBR1Q9UK59 544 aaKnown RBP6.57□□□□□ -1.36
SPIDR-216ENST00000521918 RWDD3Q9Y3V2 267 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 KIF3AQ9Y496 699 aa6.57□□□□□ -1.36
SPIDR-216ENST00000521918 PLXNA4Q9HCM2 1894 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 LAD1O00515 517 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 GRM6O15303 877 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 SART1O43290 800 aaKnown RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 USO1O60763 962 aaKnown RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 ITGB1P05556 798 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 RB1P06400 928 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 XRCC6P12956 609 aaKnown RBP eCLIP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 GLRA2P23416 452 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 DNAJB1P25685 340 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 TECP42680 631 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 PTENP60484 403 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 POU5F1BQ06416 359 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 GPM6BQ13491 265 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 GNL2Q13823 731 aaKnown RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 PDIA5Q14554 519 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 INPP5AQ14642 412 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 PAN2Q504Q3 1202 aaKnown RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 ZNF394Q53GI3 561 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 SGO2Q562F6 1265 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 RILPL1Q5EBL4 403 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 UBXN11Q5T124 520 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 CDCA2Q69YH5 1023 aaPredicted RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 CDPF1Q6NVV7 123 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 LRRC55Q6ZSA7 311 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 SRGAP1Q7Z6B7 1085 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 FAM20CQ8IXL6 584 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 ATXN2LQ8WWM7 1075 aaKnown RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 PPM1EQ8WY54 764 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 UTP4Q969X6 686 aaKnown RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 NLRP4Q96MN2 994 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 SCLT1Q96NL6 688 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 C11orf84Q9BUA3 381 aaPredicted RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 NFKBIZQ9BYH8 718 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 TMEM117Q9H0C3 514 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 LMAN2LQ9H0V9 348 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 MIR1-1HGQ9H1L0 117 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 AGPAT5Q9NUQ2 364 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 NOL7Q9UMY1 257 aaKnown RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 AP4E1Q9UPM8 1137 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 SMC3Q9UQE7 1217 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 PIN4Q9Y237 131 aaKnown RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.56□□□□□ -1.36
SPIDR-216ENST00000521918 PCDHB7Q9Y5E2 793 aa6.56□□□□□ -1.36
SPIDR-216ENST00000521918 A0A087WWV3 80 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.55□□□□□ -1.36
SPIDR-216ENST00000521918 FAM221AA4D161 298 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 TBKBP1A7MCY6 615 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 MEIS3P2A8K0S8 358 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 PP2D1A8MPX8 630 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 K7ELQ4 463 aaPredicted RBP6.55□□□□□ -1.36
SPIDR-216ENST00000521918 INPPL1O15357 1258 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 ASAP2O43150 1006 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 B4GALT3O60512 393 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 TSPAN1O60635 241 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 ZNF623O75123 536 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 EOMESO95936 686 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 EDN1P05305 212 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 H2AFB1P0C5Y9 115 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 H2AFB2P0C5Z0 115 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 ZSCAN20P17040 1043 aaPredicted RBP6.55□□□□□ -1.36
SPIDR-216ENST00000521918 NTF4P34130 210 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 RAB27AP51159 221 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 RACK1P63244 317 aaKnown RBP6.55□□□□□ -1.36
SPIDR-216ENST00000521918 TFF2Q03403 129 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 MBTD1Q05BQ5 628 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 FAM160A1Q05DH4 1040 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 MXD4Q14582 209 aaPredicted RBP6.55□□□□□ -1.36
SPIDR-216ENST00000521918 PCBP1Q15365 356 aaKnown RBP eCLIP6.55□□□□□ -1.36
SPIDR-216ENST00000521918 TIGD5Q53EQ6 642 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 NAALADL2Q58DX5 795 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 HYIQ5T013 277 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 HAUS3Q68CZ6 603 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 FBXL19Q6PCT2 694 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 LRFN4Q6PJG9 635 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 BNC2Q6ZN30 1099 aaPredicted RBP6.55□□□□□ -1.36
SPIDR-216ENST00000521918 PRR23CQ6ZRP0 262 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 DYMQ7RTS9 669 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 CATSPER4Q7RTX7 472 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 KCNK18Q7Z418 384 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 MRPL10Q7Z7H8 261 aaKnown RBP6.55□□□□□ -1.36
SPIDR-216ENST00000521918 LRRC43Q8N309 656 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 COLGALT1Q8NBJ5 622 aa6.55□□□□□ -1.36
SPIDR-216ENST00000521918 RNF149Q8NC42 400 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms