RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 CCDC105Q8IYK2 499 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 FEZF2Q8TBJ5 459 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 CPB2Q96IY4 423 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 FMO2Q99518 471 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 IP6K2Q9UHH9 426 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 PLAAQ9Y263 795 aa8.96□□□□□ -0.97
HMGB4-203ENST00000519684 PASKQ96RG2 1323 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 GPR25O00155 361 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 TLR3O15455 904 aaKnown RBP8.96□□□□□ -0.98
HMGB4-203ENST00000519684 NFICP08651 508 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 IQCF3P0C7M6 154 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 CAPN2P17655 700 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 MMP8P22894 467 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 MAN1A1P33908 653 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 HSD17B3P37058 310 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 COILP38432 576 aaPredicted RBP8.96□□□□□ -0.98
HMGB4-203ENST00000519684 TAP1Q03518 808 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 PTP4A2Q12974 167 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 SGO2Q562F6 1265 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 DUPD1Q68J44 220 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 JADE1Q6IE81 842 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 LLGL2Q6P1M3 1020 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 DNAJC24Q6P3W2 148 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 ZNF410Q86VK4 478 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 CD302Q8IX05 232 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 IQCKQ8N0W5 287 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 C12orf50Q8NA57 414 aaPredicted RBP8.96□□□□□ -0.98
HMGB4-203ENST00000519684 C1orf131Q8NDD1 294 aaKnown RBP8.96□□□□□ -0.98
HMGB4-203ENST00000519684 UBLCP1Q8WVY7 318 aaPredicted RBP8.96□□□□□ -0.98
HMGB4-203ENST00000519684 FAXDC2Q96IV6 333 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 TRIM7Q9C029 511 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 XYLT2Q9H1B5 865 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 NEUROG2Q9H2A3 272 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 ASB7Q9H672 318 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 POLIQ9UNA4 740 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 USTQ9Y2C2 406 aa8.96□□□□□ -0.98
HMGB4-203ENST00000519684 RRN3P2A6NIE6 340 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 FSCN2O14926 492 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 CSDE1O75534 798 aaKnown RBP8.95□□□□□ -0.98
HMGB4-203ENST00000519684 ECEL1O95672 775 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 RARAP10276 462 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 CD19P15391 556 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 ARF4P18085 180 aaPredicted RBP8.95□□□□□ -0.98
HMGB4-203ENST00000519684 ATICP31939 592 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 PTGIRP43119 386 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 DRG2P55039 364 aaKnown RBP8.95□□□□□ -0.98
HMGB4-203ENST00000519684 TMEM132DQ14C87 1099 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 AMHR2Q16671 573 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 SCARA3Q6AZY7 606 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 DCUN1D2Q6PH85 259 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 ERICH1Q86X53 443 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 TMEM192Q8IY95 271 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 MTRF1LQ9UGC7 380 aaKnown RBP8.95□□□□□ -0.98
HMGB4-203ENST00000519684 STRIP2Q9ULQ0 834 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 PCDHGC3Q9UN70 934 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 MGAMO43451 1857 aa8.95□□□□□ -0.98
HMGB4-203ENST00000519684 TSPAN1O60635 241 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 ITGB3P05106 788 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 HOXD8P13378 290 aaPredicted RBP8.94□□□□□ -0.98
HMGB4-203ENST00000519684 EIF4BP23588 611 aaKnown RBP8.94□□□□□ -0.98
HMGB4-203ENST00000519684 POLR2BP30876 1174 aaKnown RBP8.94□□□□□ -0.98
HMGB4-203ENST00000519684 GJC1P36383 396 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 DHX9Q08211 1270 aaKnown RBP8.94□□□□□ -0.98
HMGB4-203ENST00000519684 PPP1R7Q15435 360 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 WDR72Q3MJ13 1102 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 DCAF4L1Q3SXM0 396 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 ODF2Q5BJF6 829 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 CEP85LQ5SZL2 805 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 ZFYVE27Q5T4F4 411 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 TTC27Q6P3X3 843 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 TMC3Q7Z5M5 1100 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 C1orf127Q8N9H9 656 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 GRK7Q8WTQ7 553 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 PIK3R5Q8WYR1 880 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 ACAP3Q96P50 834 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 BCO2Q9BYV7 579 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 HOMER3Q9NSC5 361 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 SNX24Q9Y343 169 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 TCRBV7S2A1N4TA0A589 114 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 KRT14P02533 472 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 PAEPP09466 180 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 MYZAPP0CAP1 466 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 RAP1GAPP47736 663 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 CDC42EP1Q00587 391 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 SIX1Q15475 284 aaPredicted RBP8.94□□□□□ -0.98
HMGB4-203ENST00000519684 TTMPQ5BVD1 217 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 SPDYCQ5MJ68 293 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 KATNAL2Q8IYT4 538 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 NPLOC4Q8TAT6 608 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 ARL8AQ96BM9 186 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 DDX27Q96GQ7 796 aaKnown RBP8.94□□□□□ -0.98
HMGB4-203ENST00000519684 PTPN18Q99952 460 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 FAM129AQ9BZQ8 928 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 LRRC19Q9H756 370 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 CYP3A43Q9HB55 503 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 RRAGCQ9HB90 399 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 FEZ2Q9UHY8 353 aaPredicted RBP8.94□□□□□ -0.98
HMGB4-203ENST00000519684 SIX4Q9UIU6 781 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 ITGA11Q9UKX5 1188 aa8.94□□□□□ -0.98
HMGB4-203ENST00000519684 PTPN22Q9Y2R2 807 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms