RNA–Protein interactions for RNA: ENST00000519632.5

SHPRH-207, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 5,245 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-207ENST00000519632 CDKL3Q8IVW4 592 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-207ENST00000519632 PCYOX1LQ8NBM8 494 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 FAM149B1Q96BN6 582 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 CCDC28BQ9BUN5 200 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 LRMDAQ9H2I8 198 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 DKK3Q9UBP4 350 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 SLC24A2Q9UI40 661 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 CRB1P82279 1406 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 GTPBP10A4D1E9 387 aaKnown RBP12.79□□□□□ -0.36
SHPRH-207ENST00000519632 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-207ENST00000519632 PGM3O95394 542 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 PPARGP37231 505 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-207ENST00000519632 BCAR1P56945 870 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 SCARF1Q14162 830 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 SCARA5Q6ZMJ2 495 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 C17orf50Q8WW18 174 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 MYRFQ9Y2G1 1151 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 SMNDC1O75940 238 aaKnown RBP eCLIP12.79□□□□□ -0.36
SHPRH-207ENST00000519632 AKR1B1P15121 316 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 NCKAP1LP55160 1127 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 POU5F1BQ06416 359 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 RSBN1Q5VWQ0 802 aaPredicted RBP12.79□□□□□ -0.36
SHPRH-207ENST00000519632 RBM44Q6ZP01 1051 aaKnown RBP12.79□□□□□ -0.36
SHPRH-207ENST00000519632 PPIL6Q8IXY8 311 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 MED10Q9BTT4 135 aa12.79□□□□□ -0.36
SHPRH-207ENST00000519632 EML4Q9HC35 981 aaKnown RBP12.79□□□□□ -0.36
SHPRH-207ENST00000519632 USP1O94782 785 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 BGNP21810 368 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 RPL21P46778 160 aaKnown RBP12.78□□□□□ -0.36
SHPRH-207ENST00000519632 FASTKD1Q53R41 847 aaKnown RBP12.78□□□□□ -0.36
SHPRH-207ENST00000519632 PPP1R18Q6NYC8 613 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 ZNF662Q6ZS27 426 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 TMEM139Q8IV31 216 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 C1orf131Q8NDD1 294 aaKnown RBP12.78□□□□□ -0.36
SHPRH-207ENST00000519632 ECSITQ9BQ95 431 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 SEPT9Q9UHD8 586 aaPredicted RBP12.78□□□□□ -0.36
SHPRH-207ENST00000519632 KIF1BO60333 1816 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 P4HA2O15460 535 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 ADCY6O43306 1168 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 CYP2D6P10635 497 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 RALAP11233 206 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 MAP3K10Q02779 954 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 TAP1Q03518 808 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 PDK3Q15120 406 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 SMAD1Q15797 465 aaKnown RBP12.78□□□□□ -0.36
SHPRH-207ENST00000519632 RGS21Q2M5E4 152 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 DEFB107AQ8IZN7 70 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 CEP170P1Q96L14 293 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 OSBPL7Q9BZF2 842 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 NOL6Q9H6R4 1146 aaKnown RBP12.78□□□□□ -0.36
SHPRH-207ENST00000519632 ANKARQ7Z5J8 1434 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 PAMP19021 973 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 MECOMQ03112 1051 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 SLC5A9Q2M3M2 681 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 ZNF394Q53GI3 561 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 SYCP2LQ5T4T6 812 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 HEATR6Q6AI08 1181 aaKnown RBP12.78□□□□□ -0.36
SHPRH-207ENST00000519632 MTHFD1LQ6UB35 978 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 ATG4AQ8WYN0 398 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 ARHGEF26Q96DR7 871 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 CCDC17Q96LX7 622 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 GCNAQ96QF7 691 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 SEC31BQ9NQW1 1179 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 KLHL8Q9P2G9 620 aaPredicted RBP12.78□□□□□ -0.36
SHPRH-207ENST00000519632 KLHL33A6NCF5 533 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 PMLP29590 882 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 CDK16Q00536 496 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 TMEM63BQ5T3F8 832 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 PRUNE1Q86TP1 453 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 ATXN7L3BQ96GX2 97 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 FAM20AQ96MK3 541 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 UBE4BO95155 1302 aa12.78□□□□□ -0.36
SHPRH-207ENST00000519632 LRRC10BA6NIK2 292 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 A8MUI8 341 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 SHBGP04278 402 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 STAT3P40763 770 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 ZCCHC7Q8N3Z6 543 aaKnown RBP12.77□□□□□ -0.36
SHPRH-207ENST00000519632 ATP8B4Q8TF62 1192 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 TUBGCP3Q96CW5 907 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 DGCR14Q96DF8 476 aaKnown RBP12.77□□□□□ -0.36
SHPRH-207ENST00000519632 MKNK1Q9BUB5 465 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 MRPS26Q9BYN8 205 aaKnown RBP12.77□□□□□ -0.36
SHPRH-207ENST00000519632 CACYBPQ9HB71 228 aaKnown RBP12.77□□□□□ -0.36
SHPRH-207ENST00000519632 MADDQ8WXG6 1647 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 CFAP65Q6ZU64 1925 aaKnown RBP12.77□□□□□ -0.36
SHPRH-207ENST00000519632 TBKBP1A7MCY6 615 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 KRT76Q01546 638 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 GJB7Q6PEY0 223 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 NET1Q7Z628 596 aaPredicted RBP12.77□□□□□ -0.36
SHPRH-207ENST00000519632 SIX5Q8N196 739 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 GINS2Q9Y248 185 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 ABCC3O15438 1527 aa12.77□□□□□ -0.36
SHPRH-207ENST00000519632 ALAS1P13196 640 aa12.77□□□□□ -0.37
SHPRH-207ENST00000519632 NPR1P16066 1061 aa12.77□□□□□ -0.37
SHPRH-207ENST00000519632 S100A1P23297 94 aa12.77□□□□□ -0.37
SHPRH-207ENST00000519632 ITGA9Q13797 1035 aa12.77□□□□□ -0.37
SHPRH-207ENST00000519632 ZBTB49Q6ZSB9 765 aa12.77□□□□□ -0.37
SHPRH-207ENST00000519632 ZNF571Q7Z3V5 609 aaPredicted RBP12.77□□□□□ -0.37
SHPRH-207ENST00000519632 NUP93Q8N1F7 819 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms