RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 EIF3DO15371 548 aaKnown RBP eCLIP10.1□□□□□ -0.79
HDAC3-215ENST00000519474 ACTN4O43707 911 aaKnown RBP10.1□□□□□ -0.79
HDAC3-215ENST00000519474 NPR3P17342 541 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 VCPP55072 806 aaKnown RBP10.1□□□□□ -0.79
HDAC3-215ENST00000519474 DUSP4Q13115 394 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 HTR4Q13639 388 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 MYBPC2Q14324 1141 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 FAM26FQ5R3K3 315 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 WSCD1Q658N2 575 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 OVOS1Q6IE37 1185 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 CENPPQ6IPU0 288 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 ARMCX5Q6P1M9 558 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 GET4Q7L5D6 327 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-215ENST00000519474 USP37Q86T82 979 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 LRRTM3Q86VH5 581 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 BRSK2Q8IWQ3 736 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 GRAMD1CQ8IYS0 662 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 HS6ST3Q8IZP7 471 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 GPD1LQ8N335 351 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 CSGALNACT2Q8N6G5 542 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 C1orf127Q8N9H9 656 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 ATAD1Q8NBU5 361 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 CACTINQ8WUQ7 758 aaKnown RBP10.1□□□□□ -0.79
HDAC3-215ENST00000519474 SCFD1Q8WVM8 642 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 FGF14Q92915 247 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 TCEAL4Q96EI5 215 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 MCRS1Q96EZ8 462 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 FAM84AQ96KN4 292 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 RTP3Q9BQQ7 232 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 KCNH6Q9H252 994 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 CRISPLD1Q9H336 500 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 MAGEF1Q9HAY2 307 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 SLC39A2Q9NP94 309 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 DUSP12Q9UNI6 340 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 AGAP1Q9UPQ3 857 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 HPSEQ9Y251 543 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 SLC27A5Q9Y2P5 690 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 ZFP37Q9Y6Q3 630 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-215ENST00000519474 DENND4AQ7Z401 1863 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 DOCK8Q8NF50 2099 aa10.1□□□□□ -0.79
HDAC3-215ENST00000519474 SCN1AP35498 2009 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 FAM237AA0A1B0GTK4 181 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 KRBA1A5PL33 1030 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 ZNF233A6NK53 670 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 OR6C75A6NL08 312 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 KIAA0391O15091 583 aaKnown RBP10.09□□□□□ -0.79
HDAC3-215ENST00000519474 PI15O43692 258 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 MOSPD3O75425 235 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 CST3P01034 146 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-215ENST00000519474 LRG1P02750 347 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 CPB1P15086 417 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 CCR2P41597 374 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 TAF6P49848 677 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 GPC5P78333 572 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 TFAMQ00059 246 aaKnown RBP10.09□□□□□ -0.79
HDAC3-215ENST00000519474 TWF1Q12792 350 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 SLC5A9Q2M3M2 681 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 PABPC1LQ4VXU2 614 aaKnown RBP10.09□□□□□ -0.79
HDAC3-215ENST00000519474 PRSS36Q5K4E3 855 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 STXBP4Q6ZWJ1 553 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 CBWD2Q8IUF1 395 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 CNPY4Q8N129 248 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 RDH13Q8NBN7 331 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 OR10T2Q8NGX3 314 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 SPATA32Q96LK8 384 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 ZNF512Q96ME7 567 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-215ENST00000519474 PGLYRP2Q96PD5 576 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 CORO1BQ9BR76 489 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 PYM1Q9BRP8 204 aaKnown RBP10.09□□□□□ -0.79
HDAC3-215ENST00000519474 LRRC3Q9BY71 257 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 PLA2G2FQ9BZM2 168 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 INTS13Q9NVM9 706 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 RBAKQ9NYW8 714 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-215ENST00000519474 HSPBP1Q9NZL4 362 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 WNT16Q9UBV4 365 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 SIX4Q9UIU6 781 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 MRPS23Q9Y3D9 190 aaKnown RBP10.09□□□□□ -0.79
HDAC3-215ENST00000519474 INSL5Q9Y5Q6 135 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 NUMBLQ9Y6R0 609 aa10.09□□□□□ -0.79
HDAC3-215ENST00000519474 ANK1P16157 1881 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 MYH15Q9Y2K3 1946 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 MICAL2O94851 1124 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 ITGB3P05106 788 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 CFHP08603 1231 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 ODC1P11926 461 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 PFKFB1P16118 471 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 POLR2BP30876 1174 aaKnown RBP10.08□□□□□ -0.8
HDAC3-215ENST00000519474 PLA2G5P39877 138 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 CLCN5P51795 746 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 CDR1P51861 262 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 EPHA5P54756 1037 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 SNRPFP62306 86 aaKnown RBP10.08□□□□□ -0.8
HDAC3-215ENST00000519474 KRT85P78386 507 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 STK4Q13043 487 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 KNOP1Q1ED39 458 aaKnown RBP10.08□□□□□ -0.8
HDAC3-215ENST00000519474 LMBRD2Q68DH5 695 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-215ENST00000519474 SUGP1Q8IWZ8 645 aaKnown RBP10.08□□□□□ -0.8
HDAC3-215ENST00000519474 NPAS3Q8IXF0 933 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 NELFCDQ8IXH7 590 aa10.08□□□□□ -0.8
HDAC3-215ENST00000519474 CEP57L1Q8IYX8 460 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms