RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 SCAMP4Q969E2 229 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 FUBP1Q96AE4 644 aaKnown RBP4.79□□□□□ -1.64
SKP1-205ENST00000519054 LRIG1Q96JA1 1093 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 COQ10AQ96MF6 247 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 MRPL46Q9H2W6 279 aaKnown RBP4.79□□□□□ -1.64
SKP1-205ENST00000519054 MRPS18AQ9NVS2 196 aaKnown RBP4.79□□□□□ -1.64
SKP1-205ENST00000519054 PNPOQ9NVS9 261 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 PCDHA1Q9Y5I3 950 aa4.79□□□□□ -1.64
SKP1-205ENST00000519054 POLR2AP24928 1970 aaKnown RBP4.78□□□□□ -1.64
SKP1-205ENST00000519054 PRAMEF33A0A0G2JMD5 474 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 A0A1W2PS29 197 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 POLRMTO00411 1230 aaKnown RBP4.78□□□□□ -1.64
SKP1-205ENST00000519054 PRAMEF10O60809 474 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 SUN1O94901 812 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 MATN4O95460 622 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 RARBP10826 455 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 HSPA6P17066 643 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 PLA2G5P39877 138 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 FPGSQ05932 587 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 MPP3Q13368 585 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 PLS1Q14651 629 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 PREPLQ4J6C6 727 aaPredicted RBP4.78□□□□□ -1.64
SKP1-205ENST00000519054 SLC30A10Q6XR72 485 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 SSH3Q8TE77 659 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 DIS3LQ8TF46 1054 aaKnown RBP4.78□□□□□ -1.64
SKP1-205ENST00000519054 FBXO41Q8TF61 875 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 C1GALT1C1Q96EU7 318 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 SLC35A4Q96G79 324 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 FAM167AQ96KS9 214 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 TRIB1Q96RU8 372 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 CGRRF1Q99675 332 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 SMOQ99835 787 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 AIFM2Q9BRQ8 373 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 ARMT1Q9H993 441 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 NMRK2Q9NPI5 230 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 RLIMQ9NVW2 624 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 NOB1Q9ULX3 412 aaKnown RBP4.78□□□□□ -1.64
SKP1-205ENST00000519054 NEU2Q9Y3R4 380 aa4.78□□□□□ -1.64
SKP1-205ENST00000519054 MAST3O60307 1309 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 SUV39H1O43463 412 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 VPS4BO75351 444 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 RFPL1O75677 317 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 ESRRBO95718 433 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 LPOP22079 712 aaPredicted RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 GATA3P23771 443 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 MPLP40238 635 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 ANXA11P50995 505 aaKnown RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 RPS7P62081 194 aaKnown RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 POU6F2P78424 691 aaPredicted RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 NKX6-1P78426 367 aaPredicted RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 EXOSC9Q06265 439 aaKnown RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 DYRK1AQ13627 763 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 HABP2Q14520 560 aaPredicted RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 KIF22Q14807 665 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 LRRC41Q15345 812 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 SF3B3Q15393 1217 aaKnown RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 SP5Q6BEB4 398 aaPredicted RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 Q6ZNX1 250 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 ADGRG5Q8IZF4 528 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 PCSK9Q8NBP7 692 aaKnown RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 JDP2Q8WYK2 163 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 CDK5RAP3Q96JB5 506 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 AIFM3Q96NN9 605 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 CAMKK2Q96RR4 588 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 TINAGL1Q9GZM7 467 aaPredicted RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 GPR35Q9HC97 309 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 ANLNQ9NQW6 1124 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.77□□□□□ -1.65
SKP1-205ENST00000519054 KCTD5Q9NXV2 234 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 C11orf21Q9P2W6 132 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 ZDHHC8Q9ULC8 765 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 AGAP1Q9UPQ3 857 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 STXBP5LQ9Y2K9 1186 aa4.77□□□□□ -1.65
SKP1-205ENST00000519054 SALL3Q9BXA9 1300 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 M0QYG6 137 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 KIF20AO95235 890 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 SCGB1D2O95969 90 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 CHEK2O96017 543 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 GNAI2P04899 355 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 MYBP10242 640 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 CHRM3P20309 590 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 BMP5P22003 454 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 ADRA1BP35368 520 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 INHBEP58166 350 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 PURAQ00577 322 aaKnown RBP4.76□□□□□ -1.65
SKP1-205ENST00000519054 OLFML1Q6UWY5 402 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 EPM2AIP1Q7L775 607 aaPredicted RBP4.76□□□□□ -1.65
SKP1-205ENST00000519054 DENND1CQ8IV53 801 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 ANKRD13AQ8IZ07 590 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 LNX2Q8N448 690 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 CELF5Q8N6W0 485 aaKnown RBP4.76□□□□□ -1.65
SKP1-205ENST00000519054 PLBD2Q8NHP8 589 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 SLC30A5Q8TAD4 765 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 PPP1R35Q8TAP8 253 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 KLHDC4Q8TBB5 520 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 BRIX1Q8TDN6 353 aaKnown RBP4.76□□□□□ -1.65
SKP1-205ENST00000519054 SNX19Q92543 992 aa4.76□□□□□ -1.65
SKP1-205ENST00000519054 ACO2Q99798 780 aaKnown RBP4.76□□□□□ -1.65
SKP1-205ENST00000519054 CNPPD1Q9BV87 410 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms