RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 ZNF844Q08AG5 666 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 TUBA3CQ13748 450 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 BEAN1Q3B7T3 259 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 SPDYE7PQ495Y7 208 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 B3GNTL1Q67FW5 361 aaPredicted RBP4.62□□□□□ -1.67
VPS13B-207ENST00000518569 PPP4R4Q6NUP7 873 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 TUBA3EQ6PEY2 450 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 RHOUQ7L0Q8 258 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 SPRED1Q7Z699 444 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 USP37Q86T82 979 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 CFAP52Q8N1V2 620 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 Q8NA96 180 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 PDPRQ8NCN5 879 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 SLC17A8Q8NDX2 589 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 FBXO41Q8TF61 875 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 FUBP1Q96AE4 644 aaKnown RBP4.62□□□□□ -1.67
VPS13B-207ENST00000518569 BOD1Q96IK1 185 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 NT5C1BQ96P26 610 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 CNPPD1Q9BV87 410 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 TLR10Q9BXR5 811 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 TEX101Q9BY14 249 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 TRIM54Q9BYV2 358 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 DPH1Q9BZG8 443 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 IMPG2Q9BZV3 1241 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 LRRC27Q9C0I9 530 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 BHMT2Q9H2M3 363 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 ZNF768Q9H5H4 540 aaKnown RBP4.62□□□□□ -1.67
VPS13B-207ENST00000518569 RNF181Q9P0P0 153 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 HSFX1Q9UBD0 423 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 SRRDQ9UH36 339 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 CPA4Q9UI42 421 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 PAXBP1Q9Y5B6 917 aa4.62□□□□□ -1.67
VPS13B-207ENST00000518569 CCDC195A0A1B0GUA6 201 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 A0A1W2PS29 197 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 MYADML2A6NDP7 307 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 E7ENX8 843 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 E9PLN8 166 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 MYO1FO00160 1098 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 MGEA5O60502 916 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 SOAT2O75908 522 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 NCR1O76036 304 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 MYL1P05976 194 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 MYF5P13349 255 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 TNFRSF1AP19438 455 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 EN2P19622 333 aaPredicted RBP4.61□□□□□ -1.67
VPS13B-207ENST00000518569 NR4A1P22736 598 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 KCNJ5P48544 419 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 TAP2Q03519 686 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 SAFBQ15424 915 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS13B-207ENST00000518569 CRB2Q5IJ48 1285 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 APOA5Q6Q788 366 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 NOL8Q76FK4 1167 aaKnown RBP4.61□□□□□ -1.67
VPS13B-207ENST00000518569 PPP1R32Q7Z5V6 425 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 C11orf96Q7Z7L8 435 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 KRT78Q8N1N4 520 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 SYNE4Q8N205 404 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 PJA1Q8NG27 643 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 HAS1Q92839 578 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 APIPQ96GX9 242 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 SMOQ99835 787 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 VKORC1Q9BQB6 163 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 TINAGL1Q9GZM7 467 aaPredicted RBP4.61□□□□□ -1.67
VPS13B-207ENST00000518569 NUP62CLQ9H1M0 184 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.61□□□□□ -1.67
VPS13B-207ENST00000518569 PLEKHM1Q9Y4G2 1056 aa4.61□□□□□ -1.67
VPS13B-207ENST00000518569 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS13B-207ENST00000518569 ANO9A1A5B4 782 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 CCDC78A2IDD5 438 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 MATN3O15232 486 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 AKAP8O43823 692 aaKnown RBP4.6□□□□□ -1.67
VPS13B-207ENST00000518569 ERN1O75460 977 aaKnown RBP4.6□□□□□ -1.67
VPS13B-207ENST00000518569 DNAJB5O75953 348 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 ABHD16AO95870 558 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 FSHBP01225 129 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 KITP10721 976 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 KCNA2P16389 499 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 FDXRP22570 491 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 ZFP36P26651 326 aaKnown RBP4.6□□□□□ -1.67
VPS13B-207ENST00000518569 PEX2P28328 305 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 PHKA1P46020 1223 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 ZNF135P52742 658 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-207ENST00000518569 CXADRP78310 365 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 HSD11B2P80365 405 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 AMOTQ4VCS5 1084 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 TIGD2Q4W5G0 525 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 FAM160B1Q5W0V3 765 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 TMPRSS9Q7Z410 1059 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 COL23A1Q86Y22 540 aaPredicted RBP4.6□□□□□ -1.67
VPS13B-207ENST00000518569 ARHGEF19Q8IW93 802 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 CELF5Q8N6W0 485 aaKnown RBP4.6□□□□□ -1.67
VPS13B-207ENST00000518569 OR6B3Q8NGW1 331 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 POC1BQ8TC44 478 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 TRIB1Q96RU8 372 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 ZSWIM1Q9BR11 485 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 BTBD1Q9H0C5 482 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 ARNT2Q9HBZ2 717 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 GALNT9Q9HCQ5 603 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 ETAA1Q9NY74 926 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 GPRC5BQ9NZH0 403 aa4.6□□□□□ -1.67
VPS13B-207ENST00000518569 CTTNBP2NLQ9P2B4 639 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms