RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 SRGAP2BP0DMP2 458 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 P4HA1P13674 534 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 KLRC2P26717 231 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 PIK3CAP42336 1068 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 MYL6P60660 151 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 TNNC1P63316 161 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 MYL5Q02045 173 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 COL19A1Q14993 1142 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 ZNF699Q32M78 642 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 ZSCAN23Q3MJ62 389 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 ANO6Q4KMQ2 910 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 OVOS1Q6IE37 1185 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 ZNF280DQ6N043 979 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 PRSS55Q6UWB4 352 aaPredicted RBP12.79□□□□□ -0.36
SNF8-215ENST00000515572 RBM23Q86U06 439 aaKnown RBP12.79□□□□□ -0.36
SNF8-215ENST00000515572 TMEM86AQ8N2M4 240 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 TOP6BLQ8N6T0 577 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 EFHBQ8N7U6 833 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 CCDC150Q8NCX0 1101 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 CNOT6LQ96LI5 555 aaKnown RBP12.79□□□□□ -0.36
SNF8-215ENST00000515572 KLHL5Q96PQ7 755 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 BPIFA3Q9BQP9 254 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 FUCA2Q9BTY2 467 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 XYLT2Q9H1B5 865 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 MMRN2Q9H8L6 949 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 DPP7Q9UHL4 492 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 SNX9Q9Y5X1 595 aa12.79□□□□□ -0.36
SNF8-215ENST00000515572 OR6C75A6NL08 312 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 PER2O15055 1255 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 P4HA2O15460 535 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 TEX28O15482 410 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 CLASP2O75122 1294 aaKnown RBP12.78□□□□□ -0.36
SNF8-215ENST00000515572 ASS1P00966 412 aaKnown RBP12.78□□□□□ -0.36
SNF8-215ENST00000515572 HLA-DRAP01903 254 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 PRKCSHP14314 528 aaPredicted RBP12.78□□□□□ -0.36
SNF8-215ENST00000515572 MTIF2P46199 727 aaKnown RBP12.78□□□□□ -0.36
SNF8-215ENST00000515572 FMO5P49326 533 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 CETN1Q12798 172 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 CCDC85BQ15834 202 aaPredicted RBP12.78□□□□□ -0.36
SNF8-215ENST00000515572 WDR72Q3MJ13 1102 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 CTXN3Q4LDR2 81 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 ZNF667Q5HYK9 610 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 SCARA3Q6AZY7 606 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 SLC8B1Q6J4K2 584 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 ELMSAN1Q6PJG2 1045 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 IRF2BP1Q8IU81 584 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 THEM5Q8N1Q8 247 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 FBXL13Q8NEE6 735 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 PABPC5Q96DU9 382 aaKnown RBP12.78□□□□□ -0.36
SNF8-215ENST00000515572 FAXDC2Q96IV6 333 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 FBXL5Q9UKA1 691 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 COQ4Q9Y3A0 265 aa12.78□□□□□ -0.36
SNF8-215ENST00000515572 TBC1D4O60343 1298 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 CLSTN1O94985 981 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 AFPP02771 609 aaKnown RBP12.77□□□□□ -0.37
SNF8-215ENST00000515572 EEF1GP26641 437 aaKnown RBP12.77□□□□□ -0.37
SNF8-215ENST00000515572 MYL7Q01449 175 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 KCNH2Q12809 1159 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 ADAM15Q13444 863 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 RAB33AQ14088 237 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 SOWAHAQ2M3V2 549 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 CTC1Q2NKJ3 1217 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 CBWD6Q4V339 395 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 CBWD3Q5JTY5 395 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 CBWD5Q5RIA9 395 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 WSCD1Q658N2 575 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 TMEM184AQ6ZMB5 413 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 LIMS2Q7Z4I7 341 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 CREBRFQ8IUR6 639 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 ADGRF2Q8IZF7 708 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 PDCL2Q8N4E4 241 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 TAS1R2Q8TE23 839 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 SLC22A17Q8WUG5 538 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 PPM1EQ8WY54 764 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 MMS19Q96T76 1030 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 IGFLR1Q9H665 355 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 SAMSN1Q9NSI8 373 aaKnown RBP12.77□□□□□ -0.37
SNF8-215ENST00000515572 RAB20Q9NX57 234 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 TIMM13Q9Y5L4 95 aaPredicted RBP12.77□□□□□ -0.37
SNF8-215ENST00000515572 CDY1Q9Y6F8 540 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 SZT2Q5T011 3432 aa12.77□□□□□ -0.37
SNF8-215ENST00000515572 SMTNL1A8MU46 457 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 KCNJ18B7U540 433 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 TACC1O75410 805 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 GLUD1P00367 558 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
SNF8-215ENST00000515572 OR1D2P34982 312 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 LHX1P48742 406 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 ZNF165P49910 485 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 CLCN4P51793 760 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 KCNC3Q14003 757 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 KCNJ12Q14500 433 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 SKIV2LQ15477 1246 aaKnown RBP12.76□□□□□ -0.37
SNF8-215ENST00000515572 MAN2A1Q16706 1144 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 TCP11X2Q5H9J9 407 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 WDR44Q5JSH3 913 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 CDKAL1Q5VV42 579 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 ZNF461Q8TAF7 563 aa12.76□□□□□ -0.37
SNF8-215ENST00000515572 HDAC7Q8WUI4 952 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms