RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 NAP1L4Q99733 375 aaKnown RBP11.9□□□□□ -0.5
NFKB1-211ENST00000513803 HSD17B14Q9BPX1 270 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 TOPORSQ9NS56 1045 aaPredicted RBP11.9□□□□□ -0.5
NFKB1-211ENST00000513803 GKN1Q9NS71 199 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 YIPF1Q9Y548 306 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 ASB3Q9Y575 518 aa11.9□□□□□ -0.5
NFKB1-211ENST00000513803 URB1O60287 2271 aaKnown RBP11.9□□□□□ -0.5
NFKB1-211ENST00000513803 CCDC194A0A1B0GVG4 234 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
NFKB1-211ENST00000513803 EGFP01133 1207 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 DHPSP49366 369 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-211ENST00000513803 MCM2P49736 904 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 RARRES1P49788 294 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 SCAPQ12770 1279 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 DMC1Q14565 340 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 Q6ZUG5 572 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 MAEAQ7L5Y9 396 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 PIP4P1Q86T03 277 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 TMC8Q8IU68 726 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 DAGLBQ8NCG7 672 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 MCPH1Q8NEM0 835 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 CCDC26Q8TAB7 109 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 ACDQ96AP0 544 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 SUSD3Q96L08 255 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 EIF2AK1Q9BQI3 630 aaKnown RBP11.89□□□□□ -0.51
NFKB1-211ENST00000513803 FAM83CQ9BQN1 747 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 OXCT2Q9BYC2 517 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-211ENST00000513803 POLR3BQ9NW08 1133 aaPredicted RBP11.89□□□□□ -0.51
NFKB1-211ENST00000513803 INVSQ9Y283 1065 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 NUP205Q92621 2012 aa11.89□□□□□ -0.51
NFKB1-211ENST00000513803 USO1O60763 962 aaKnown RBP11.88□□□□□ -0.51
NFKB1-211ENST00000513803 LIG1P18858 919 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 MAPK8P45983 427 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 GALK1P51570 392 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 SOX4Q06945 474 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-211ENST00000513803 SSRP1Q08945 709 aaKnown RBP11.88□□□□□ -0.51
NFKB1-211ENST00000513803 C19orf57Q0VDD7 668 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 DUSP4Q13115 394 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 SEMA3BQ13214 749 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 HNRNPDQ14103 355 aaKnown RBP11.88□□□□□ -0.51
NFKB1-211ENST00000513803 TRIM61Q5EBN2 209 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 EEF1DP3Q658K8 133 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 GAREM2Q75VX8 874 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 DNAJB7Q7Z6W7 309 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-211ENST00000513803 ITIH5Q86UX2 942 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 RASEFQ8IZ41 740 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 HDDC3Q8N4P3 179 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 BEST2Q8NFU1 509 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 TSTD1Q8NFU3 115 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 RPLP0P6Q8NHW5 317 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 HNRNPLLQ8WVV9 542 aaKnown RBP11.88□□□□□ -0.51
NFKB1-211ENST00000513803 DDX12PQ92771 950 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 BBC3Q96PG8 261 aaPredicted RBP11.88□□□□□ -0.51
NFKB1-211ENST00000513803 P2RY13Q9BPV8 354 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 CCDC86Q9H6F5 360 aaKnown RBP11.88□□□□□ -0.51
NFKB1-211ENST00000513803 TASP1Q9H6P5 420 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 GPRC5CQ9NQ84 441 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 ZMYM5Q9UJ78 669 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 NID2Q14112 1375 aa11.88□□□□□ -0.51
NFKB1-211ENST00000513803 EML5Q05BV3 1969 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 OAZ2O95190 189 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 ATP2B1P20020 1258 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 GABRR2P28476 465 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 MCM4P33991 863 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 DPP6P42658 865 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 EFNA5P52803 228 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 ATXN3P54252 364 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-211ENST00000513803 XKR4Q5GH76 650 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 ATF7IP2Q5U623 682 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 ALKAL1Q6UXT8 129 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 RAB44Q7Z6P3 723 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-211ENST00000513803 DEPTORQ8TB45 409 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 PIGOQ8TEQ8 1089 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 PSMG2Q969U7 264 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 LRIG1Q96JA1 1093 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 NACC1Q96RE7 527 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 CCDC94Q9BW85 323 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-211ENST00000513803 DNAJC25Q9H1X3 360 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 EBF3Q9H4W6 596 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 FBRSL1Q9HCM7 1045 aaKnown RBP11.87□□□□□ -0.51
NFKB1-211ENST00000513803 PCDHA12Q9UN75 941 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 USP20Q9Y2K6 914 aa11.87□□□□□ -0.51
NFKB1-211ENST00000513803 PI4KAP42356 2102 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 TNFRSF10BO14763 440 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 DEXIO95424 95 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 PRAMEF12O95522 483 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 KCNE1P15382 129 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 ENGP17813 658 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 PSMD2Q13200 908 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 GPR17Q13304 367 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 PPP2R5AQ15172 486 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 CC2D1AQ6P1N0 951 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-211ENST00000513803 LPCAT2Q7L5N7 544 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 SYT12Q8IV01 421 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 FBXL16Q8N461 479 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 ADAM32Q8TC27 787 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 PGLYRP2Q96PD5 576 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 GCNAQ96QF7 691 aa11.86□□□□□ -0.51
NFKB1-211ENST00000513803 CCDC113Q9H0I3 377 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms