RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RALGDSQ12967 914 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 SEMA3FQ13275 785 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 PPP1R18Q6NYC8 613 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 FGD2Q7Z6J4 655 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 USP13Q92995 863 aaPredicted RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 DEPDC7Q96QD5 511 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 TMEM60Q9H2L4 133 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 OSGEPL1Q9H4B0 414 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 PDE11AQ9HCR9 933 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 KRCC1Q9NPI7 259 aaPredicted RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 PARVAQ9NVD7 372 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 NDOR1Q9UHB4 597 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 PNPLA7Q6ZV29 1317 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CCDC188H7C350 402 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 PCDH8O95206 1070 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 EGFRP00533 1210 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 YWHAQP27348 245 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 AVPR1AP37288 418 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 RGS7P49802 495 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 YWHAZP63104 245 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 MST1RQ04912 1400 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 PWP1Q13610 501 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 TOMM20Q15388 145 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 TTLL9Q3SXZ7 439 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 SGO1Q5FBB7 561 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 TRIM65Q6PJ69 517 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 EPM2AIP1Q7L775 607 aaPredicted RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 RHOT1Q8IXI2 618 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CSGALNACT1Q8TDX6 532 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 PTPRN2Q92932 1015 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CENPTQ96BT3 561 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 PPP1R2P1Q96PQ5 205 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 TMEM47Q9BQJ4 181 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CINPQ9BW66 212 aaPredicted RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 FOXP3Q9BZS1 431 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 SPATS2LQ9NUQ6 558 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 NMRK1Q9NWW6 199 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 GALNT8Q9NY28 637 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.05□□□□□ -1.44
USP38-203ENST00000511739 PLA2G4CQ9UP65 541 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 AURKCQ9UQB9 309 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 SNX24Q9Y343 169 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 RRN3P2A6NIE6 340 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CLASP2O75122 1294 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 RFX5P48382 616 aaPredicted RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 POLE2P56282 527 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 ALDH6A1Q02252 535 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 PDIA2Q13087 525 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 UGP2Q16851 508 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 SHROOM1Q2M3G4 852 aaPredicted RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 HLA-DQA1Q5Y7H0 255 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 ICE2Q659A1 982 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 VN1R5Q7Z5H4 357 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 NUP93Q8N1F7 819 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 SLC25A41Q8N5S1 370 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CEP70Q8NHQ1 597 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 STK33Q9BYT3 514 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CIPCQ9C0C6 399 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 POLD4Q9HCU8 107 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 MPP6Q9NZW5 540 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 A0A087WWV3 80 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 C17orf102A2RUQ5 167 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 GOLGA8TH3BQL2 631 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 EEF2KO00418 725 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 RGL2O15211 777 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 PRDX5P30044 214 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CYP2C19P33261 490 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 TRIM32Q13049 653 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 ZNF284Q2VY69 593 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CEP55Q53EZ4 464 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 XKR3Q5GH77 459 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 NOL9Q5SY16 702 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 SGMS1Q86VZ5 419 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 LRRC8AQ8IWT6 810 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 ANKRD13AQ8IZ07 590 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 ZNF555Q8NEP9 628 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 GJD4Q96KN9 370 aaPredicted RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 LNPEPQ9UIQ6 1025 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 ZDHHC9Q9Y397 364 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 SPTLC1O15269 473 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 HNRNPRO43390 633 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 PGK2P07205 417 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 SUPT20HL2P0C7V6 817 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CYP2D6P10635 497 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 SERPINB4P48594 390 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 TGM3Q08188 693 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 SCARF1Q14162 830 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 HLFQ16534 295 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 LUZP2Q86TE4 346 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 CLYBLQ8N0X4 340 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 ATP6V0D2Q8N8Y2 350 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 ZNF579Q8NAF0 562 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 C18orf8Q96DM3 657 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 NEUROD4Q9HD90 331 aa6.05□□□□□ -1.44
USP38-203ENST00000511739 PIH1D3Q9NQM4 214 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 ZC3H7BQ9UGR2 993 aaKnown RBP6.05□□□□□ -1.44
USP38-203ENST00000511739 A0A087WUV0 522 aaPredicted RBP6.04□□□□□ -1.44
USP38-203ENST00000511739 EVPLLA8MZ36 301 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 POTECB2RU33 542 aa6.04□□□□□ -1.44
USP38-203ENST00000511739 PLEKHA8P1O95397 391 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms