RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 FSHRP23945 695 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 POLR2BP30876 1174 aaKnown RBP12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 ADCY1Q08828 1119 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 SIGLEC14Q08ET2 396 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 DPYDQ12882 1025 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 PSMD2Q13200 908 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 MYBPC2Q14324 1141 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 LMBRD2Q68DH5 695 aaPredicted RBP12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 KRBA2Q6ZNG9 492 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 HFE2Q6ZVN8 426 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 GET4Q7L5D6 327 aaPredicted RBP12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 HS2ST1Q7LGA3 356 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 ASIC4Q96FT7 647 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 TMEM209Q96SK2 561 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 RTP3Q9BQQ7 232 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 MTMR12Q9C0I1 747 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 KCNK12Q9HB15 430 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 INTS13Q9NVM9 706 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 CGNQ9P2M7 1197 aaKnown RBP12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 RAPGEFL1Q9UHV5 662 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 SIX4Q9UIU6 781 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 MAFFQ9ULX9 164 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 POLIQ9UNA4 740 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 AGAP1Q9UPQ3 857 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 INSL5Q9Y5Q6 135 aa12.54□□□□□ -0.4
SH3RF1-205ENST00000511421 KPNA7A9QM74 516 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 PRRG1O14668 218 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 RPN1P04843 607 aaKnown RBP12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 LAMP2P13473 410 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 CYP2J2P51589 502 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 GPR17Q13304 367 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 MTMR3Q13615 1198 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 SURF1Q15526 300 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 SNRNP35Q16560 246 aaKnown RBP12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 SV2CQ496J9 727 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 WSCD1Q658N2 575 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 BMP8AQ7Z5Y6 402 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 UBALD2Q8IYN6 164 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 CSGALNACT2Q8N6G5 542 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 XXYLT1Q8NBI6 393 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 OR5B17Q8NGF7 314 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 OR10T2Q8NGX3 314 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 ITFG1Q8TB96 612 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 ZNF560Q96MR9 790 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 IGSF9Q9P2J2 1179 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 ITGA11Q9UKX5 1188 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 DSEQ9UL01 958 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 NOTCH4Q99466 2003 aa12.53□□□□□ -0.4
SH3RF1-205ENST00000511421 TULP1O00294 542 aaPredicted RBP12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 RHOBTB3O94955 611 aa12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 LRG1P02750 347 aa12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 PNPLA4P41247 253 aa12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 CYP24A1Q07973 514 aa12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 PABPC1LQ4VXU2 614 aaKnown RBP12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 LRRC52Q8N7C0 313 aa12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 RSAD2Q8WXG1 361 aa12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 GZF1Q9H116 711 aaPredicted RBP12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 CRISPLD1Q9H336 500 aa12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 KCTD10Q9H3F6 313 aa12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 AVENQ9NQS1 362 aaPredicted RBP12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 DMAC2Q9NW81 257 aa12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 CDH7Q9ULB5 785 aa12.52□□□□□ -0.4
SH3RF1-205ENST00000511421 ZDBF2Q9HCK1 2354 aa12.52□□□□□ -0.41
SH3RF1-205ENST00000511421 MTMR11A4FU01 709 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 ANHXE9PGG2 379 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 RHOP08100 348 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 TMEM191BP0C7N4 346 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 PTPN2P17706 415 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 RBP5P82980 135 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 TDGQ13569 410 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 PSMD6Q15008 389 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 DUOXA2Q1HG44 320 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 SLC5A9Q2M3M2 681 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 CENPPQ6IPU0 288 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 POTEHQ6S545 545 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 WDR49Q8IV35 697 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 FMR1NBQ8N0W7 255 aaPredicted RBP12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 ATAD1Q8NBU5 361 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 GOLGA5Q8TBA6 731 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 TMEM174Q8WUU8 243 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 FGF13Q92913 245 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 ANKRD36BP1Q96IX9 119 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 MFSD14AQ96MC6 490 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 PGLYRP2Q96PD5 576 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 ZCWPW1Q9H0M4 648 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 GDAP2Q9NXN4 497 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 CEP72Q9P209 647 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 ZFP37Q9Y6Q3 630 aaPredicted RBP12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 KRT19P08727 400 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 TWF1Q12792 350 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 DUSP4Q13115 394 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 SNW1Q13573 536 aaKnown RBP12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 HTR4Q13639 388 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 LRRTM3Q86VH5 581 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 METTL23Q86XA0 190 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 SLC9A9Q8IVB4 645 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 PDCL2Q8N4E4 241 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 ENGASEQ8NFI3 743 aa12.51□□□□□ -0.41
SH3RF1-205ENST00000511421 NXPE3Q969Y0 559 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms