RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 B3GALT6Q96L58 329 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 FAM161BQ96MY7 647 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 INTS2Q9H0H0 1204 aaKnown RBP15.91■□□□□ 0.14
RNF4-213ENST00000509388 RBSNQ9H1K0 784 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 TTYH1Q9H313 450 aaPredicted RBP15.91■□□□□ 0.14
RNF4-213ENST00000509388 PRDM12Q9H4Q4 367 aa15.91■□□□□ 0.14
RNF4-213ENST00000509388 TIMM13Q9Y5L4 95 aaPredicted RBP15.91■□□□□ 0.14
RNF4-213ENST00000509388 TDRD15B5MCY1 1934 aaKnown RBP15.91■□□□□ 0.14
RNF4-213ENST00000509388 FGFR3P22607 806 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 TKTP29401 623 aaKnown RBP15.9■□□□□ 0.14
RNF4-213ENST00000509388 ERVFC1P60507 584 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 GRIN2CQ14957 1233 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 VARS2Q5ST30 1063 aaKnown RBP15.9■□□□□ 0.14
RNF4-213ENST00000509388 PLPP4Q5VZY2 271 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 WSCD1Q658N2 575 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 OVOS1Q6IE37 1185 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 GPR153Q6NV75 609 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 SCARA5Q6ZMJ2 495 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 ANKS3Q6ZW76 656 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 GAS2L3Q86XJ1 694 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 ELMO3Q96BJ8 720 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 GAS2L1Q99501 681 aaPredicted RBP15.9■□□□□ 0.14
RNF4-213ENST00000509388 VN1R3Q9BXE9 311 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 DNAI2Q9GZS0 605 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 NIF3L1Q9GZT8 377 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 ZBP1Q9H171 429 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 SNX25Q9H3E2 840 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 CHST7Q9NS84 486 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 POLIQ9UNA4 740 aa15.9■□□□□ 0.14
RNF4-213ENST00000509388 TRIOBPQ9H2D6 2365 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.89■□□□□ 0.13
RNF4-213ENST00000509388 EPOPA6NHQ4 379 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 CBFA2T2O43439 604 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 LRRN2O75325 713 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 FAM163BP0C2L3 166 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 SLC9A1P19634 815 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 TBXAS1P24557 533 aaPredicted RBP15.89■□□□□ 0.13
RNF4-213ENST00000509388 LHX1P48742 406 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 DSG1Q02413 1049 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 CREMQ03060 361 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 SOWAHAQ2M3V2 549 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 CTXN3Q4LDR2 81 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 RTP2Q5QGT7 225 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 ZNF280DQ6N043 979 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 RNF168Q8IYW5 571 aaPredicted RBP15.89■□□□□ 0.13
RNF4-213ENST00000509388 ADGRF2Q8IZF7 708 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 PPM1KQ8N3J5 372 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 PDCL2Q8N4E4 241 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 OR6B3Q8NGW1 331 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 TATDN2Q93075 761 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 PPP2R3CQ969Q6 453 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 FAXDC2Q96IV6 333 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 FAM81BQ96LP2 452 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 EMILIN2Q9BXX0 1053 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 CYP3A43Q9HB55 503 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 APOBEC3GQ9HC16 384 aaKnown RBP15.89■□□□□ 0.13
RNF4-213ENST00000509388 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.89■□□□□ 0.13
RNF4-213ENST00000509388 L1RE1Q9UN81 338 aa15.89■□□□□ 0.13
RNF4-213ENST00000509388 TRIP11Q15643 1979 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 TACC1O75410 805 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 EFEMP2O95967 443 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 CYP11A1P05108 521 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 TRIM21P19474 475 aaKnown RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 IGFBP4P22692 258 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 DNAJB1P25685 340 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 PON1P27169 355 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 GNL1P36915 607 aaPredicted RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 YWHAEP62258 255 aaKnown RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 PSMD5Q16401 504 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 KIAA0319Q5VV43 1072 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 TRIM65Q6PJ69 517 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 APTXQ7Z2E3 356 aaKnown RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 GPR65Q8IYL9 337 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 TTC39CQ8N584 583 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 MRPL43Q8N983 215 aaKnown RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 LNX1Q8TBB1 728 aaPredicted RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 SPATA18Q8TC71 538 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 AUTS2Q8WXX7 1259 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 PIK3R5Q8WYR1 880 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 MRPL38Q96DV4 380 aaKnown RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 NAP1L5Q96NT1 182 aaPredicted RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 LSM14BQ9BX40 385 aaKnown RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 OXCT2Q9BYC2 517 aaPredicted RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 RTN4Q9NQC3 1192 aaKnown RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 DDX43Q9NXZ2 648 aaKnown RBP15.88■□□□□ 0.13
RNF4-213ENST00000509388 IFNKQ9P0W0 207 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 ANK1P16157 1881 aa15.88■□□□□ 0.13
RNF4-213ENST00000509388 A0A1B0GTH6 734 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 A8MXQ7 604 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 OAZ2O95190 189 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 WEE2P0C1S8 567 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 CD58P19256 250 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 IRS1P35568 1242 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 ASPAP45381 313 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 MFAP3P55082 362 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 CDH8P55286 799 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 ARPP19P56211 112 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 CUL2Q13617 745 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 NR1I3Q14994 352 aa15.87■□□□□ 0.13
RNF4-213ENST00000509388 SYCP1Q15431 976 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms