RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 STXBP4Q6ZWJ1 553 aa16.01■□□□□ 0.15
UBE2D3-228ENST00000508974 BRSK2Q8IWQ3 736 aa16.01■□□□□ 0.15
UBE2D3-228ENST00000508974 NPAS3Q8IXF0 933 aa16.01■□□□□ 0.15
UBE2D3-228ENST00000508974 HS6ST3Q8IZP7 471 aa16.01■□□□□ 0.15
UBE2D3-228ENST00000508974 GPR152Q8TDT2 470 aa16.01■□□□□ 0.15
UBE2D3-228ENST00000508974 TCEAL4Q96EI5 215 aa16.01■□□□□ 0.15
UBE2D3-228ENST00000508974 CRISPLD1Q9H336 500 aa16.01■□□□□ 0.15
UBE2D3-228ENST00000508974 TMEM206Q9H813 350 aa16.01■□□□□ 0.15
UBE2D3-228ENST00000508974 SLC27A5Q9Y2P5 690 aa16.01■□□□□ 0.15
UBE2D3-228ENST00000508974 YIPF1Q9Y548 306 aa16.01■□□□□ 0.15
UBE2D3-228ENST00000508974 ANHXE9PGG2 379 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 CYB561D2O14569 222 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 SOAT2O75908 522 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 VNN2O95498 520 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 LDHAP00338 332 aaKnown RBP16■□□□□ 0.15
UBE2D3-228ENST00000508974 ITGB3P05106 788 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 SRFP11831 508 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 MYL4P12829 197 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 TYMPP19971 482 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 RFX1P22670 979 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 POLR2BP30876 1174 aaKnown RBP16■□□□□ 0.15
UBE2D3-228ENST00000508974 DUSP4Q13115 394 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 FAM26FQ5R3K3 315 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 LMBRD2Q68DH5 695 aaPredicted RBP16■□□□□ 0.15
UBE2D3-228ENST00000508974 CWF19L1Q69YN2 538 aaKnown RBP16■□□□□ 0.15
UBE2D3-228ENST00000508974 SCARA3Q6AZY7 606 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 RTL10Q7L3V2 364 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 NELFCDQ8IXH7 590 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 ELMOD1Q8N336 334 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 TTC9BQ8N6N2 239 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 KCNH6Q9H252 994 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 PDE11AQ9HCR9 933 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 CEP72Q9P209 647 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 SERTAD1Q9UHV2 236 aa16■□□□□ 0.15
UBE2D3-228ENST00000508974 ZFP37Q9Y6Q3 630 aaPredicted RBP16■□□□□ 0.15
UBE2D3-228ENST00000508974 KRBA1A5PL33 1030 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 OR6C75A6NL08 312 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 NRG2O14511 850 aaPredicted RBP15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 EXTL3O43909 919 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 KRT19P08727 400 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 GJA1P17302 382 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 HOXD13P35453 343 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 CCR2P41597 374 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 CUL4BQ13620 913 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 SLC39A12Q504Y0 691 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 ATL3Q6DD88 541 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 ASTLQ6HA08 431 aaPredicted RBP15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 IQCEQ6IPM2 695 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 PDZD4Q76G19 769 aaPredicted RBP15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 METTL23Q86XA0 190 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 GPD1LQ8N335 351 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 OR10T2Q8NGX3 314 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 NXPE3Q969Y0 559 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 ZNF512Q96ME7 567 aaPredicted RBP15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 C7orf25Q9BPX7 421 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 FAM86C1Q9NVL1 165 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 RCOR1Q9UKL0 485 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 KCNH3Q9ULD8 1083 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 AGAP1Q9UPQ3 857 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 ZDHHC9Q9Y397 364 aa15.99■□□□□ 0.15
UBE2D3-228ENST00000508974 A0A1B0GVL5 298 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 MTMR11A4FU01 709 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 KPNA7A9QM74 516 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 PI15O43692 258 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 NPR3P17342 541 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 PTPN5P54829 565 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 GPC5P78333 572 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 TCF15Q12870 199 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 BFSP1Q12934 665 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 GPR17Q13304 367 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 SV2CQ496J9 727 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 PRSS36Q5K4E3 855 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 CYP4A22Q5TCH4 519 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 WSCD1Q658N2 575 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 UNC13DQ70J99 1090 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 MTSS1LQ765P7 747 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 CBWD2Q8IUF1 395 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 CEP57L1Q8IYX8 460 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 C1orf127Q8N9H9 656 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 RDH13Q8NBN7 331 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 ATAD1Q8NBU5 361 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 SPATA32Q96LK8 384 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 ZNF560Q96MR9 790 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 PHOX2BQ99453 314 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 MTMR12Q9C0I1 747 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 MAGEF1Q9HAY2 307 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 SLC39A2Q9NP94 309 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 HSPBP1Q9NZL4 362 aa15.98■□□□□ 0.15
UBE2D3-228ENST00000508974 PTPRJQ12913 1337 aa15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 H0Y858 1186 aa15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 CLIC2O15247 247 aa15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 CYP11A1P05108 521 aa15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 TMEM191BP0C7N4 346 aa15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 PFKFB1P16118 471 aa15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 CYP2J2P51589 502 aa15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 POU5F1Q01860 360 aaKnown RBP15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 MYBPC2Q14324 1141 aa15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 EPM2AIP1Q7L775 607 aaPredicted RBP15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 ALYREFQ86V81 257 aaKnown RBP15.97■□□□□ 0.15
UBE2D3-228ENST00000508974 NT5DC4Q86YG4 428 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms