RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 HVCN1Q96D96 273 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 SENP8Q96LD8 212 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 ZSWIM3Q96MP5 696 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 ASB16Q96NS5 453 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 USP28Q96RU2 1077 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 DNAJC25Q9H1X3 360 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 ASB7Q9H672 318 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 ASAH2Q9NR71 780 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 AGO2Q9UKV8 859 aaKnown RBP14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 DERAQ9Y315 318 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 MTF2Q9Y483 593 aaPredicted RBP14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 GPR179Q6PRD1 2367 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 NCANO14594 1321 aa14.1□□□□□ -0.15
HMGCS1-205ENST00000508319 DMXL1Q9Y485 3027 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 A0A087X0B3 334 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 MTMR11A4FU01 709 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 SHISA7A6NL88 538 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 TXLNAP40222 546 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 KCNA1Q09470 495 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 DUSP4Q13115 394 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 MYBPC2Q14324 1141 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 RRAGBQ5VZM2 374 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 SLFN12LQ6IEE8 588 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 CRELD2Q6UXH1 353 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 TPRG1Q6ZUI0 275 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 TMC8Q8IU68 726 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 C1orf210Q8IVY1 113 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 EFCAB13Q8IY85 973 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 TTC9BQ8N6N2 239 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 LEMD2Q8NC56 503 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 OR10T2Q8NGX3 314 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 SHKBP1Q8TBC3 707 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 SMARCD2Q92925 531 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 ZNF512Q96ME7 567 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 TMEM209Q96SK2 561 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 LRRC3Q9BY71 257 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 BACH2Q9BYV9 841 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 ZFP14Q9HCL3 533 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 LTB4R2Q9NPC1 389 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 HEBP1Q9NRV9 189 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 SEL1LQ9UBV2 794 aa14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 NUP210Q8TEM1 1887 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-205ENST00000508319 FRMD3A2A2Y4 597 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 K7ELQ4 463 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 CYP11A1P05108 521 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 MYL4P12829 197 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 GJA1P17302 382 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 GAP43P17677 238 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 CD72P21854 359 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 NASPP49321 788 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 CASP5P51878 434 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 POU5F1Q01860 360 aaKnown RBP14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 PLD1Q13393 1074 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 GRM2Q14416 872 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 UBXN2BQ14CS0 331 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 SLC39A14Q15043 492 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 TEAD2Q15562 447 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 L1TD1Q5T7N2 865 aaKnown RBP14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 CENPPQ6IPU0 288 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 VITQ6UXI7 678 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 CCDC73Q6ZRK6 1079 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 SV2BQ7L1I2 683 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 MAML2Q8IZL2 1156 aaPredicted RBP14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 ATAD1Q8NBU5 361 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 POMGNT1Q8WZA1 660 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 DNASE1L2Q92874 299 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 OSBPL6Q9BZF3 934 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 MRPL44Q9H9J2 332 aaKnown RBP14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 OLFML3Q9NRN5 406 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 TBC1D7Q9P0N9 293 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 R4GN57 208 aa14.08□□□□□ -0.16
HMGCS1-205ENST00000508319 FAM170BA6NMN3 283 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 STX6O43752 255 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 SOAT2O75908 522 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 SP9P0CG40 484 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 PAX3P23760 479 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 TARSP26639 723 aaKnown RBP14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 STAT6P42226 847 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 EPHB3P54753 998 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 WNT7BP56706 349 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 ZSWIM2Q8NEG5 633 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 ZSCAN18Q8TBC5 510 aaPredicted RBP14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 FGFBP2Q9BYJ0 223 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 BCO2Q9BYV7 579 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 TRPV4Q9HBA0 871 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 DPP3Q9NY33 737 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 SLC27A5Q9Y2P5 690 aa14.07□□□□□ -0.16
HMGCS1-205ENST00000508319 DNAH14Q0VDD8 3507 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 A0A1W2PRU2 124 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 IL18RAPO95256 599 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 GCNT3O95395 438 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 PSMC3P17980 439 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 VIPR2P41587 438 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 TAF6P49848 677 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 POSTNQ15063 836 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 STXBP5Q5T5C0 1151 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 ZNF852Q6ZMS4 543 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 BRSK2Q8IWQ3 736 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 ADSSL1Q8N142 457 aa14.06□□□□□ -0.16
HMGCS1-205ENST00000508319 ZNF687Q8N1G0 1237 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms