RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 IGLV3-22A0A075B6J6 115 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 EXOC1LA0A1B0GW35 172 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 PDLIM1O00151 329 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 CALUO43852 315 aaPredicted RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 EDF1O60869 148 aaKnown RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 SUPT3HO75486 399 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 USP1O94782 785 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 TROVE2P10155 538 aaKnown RBP eCLIP13.41□□□□□ -0.26
DDR1-262ENST00000508312 ESRRAP11474 423 aaPredicted RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 CHRNB2P17787 502 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 AMPD1P23109 780 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 CDK7P50613 346 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 EPC2Q52LR7 807 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 SGO2Q562F6 1265 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 TATDN1Q6P1N9 297 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 CCDC62Q6P9F0 684 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 CYFIP1Q7L576 1253 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 FAM178BQ8IXR5 827 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 C10orf82Q8WW14 230 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 CRYGNQ8WXF5 182 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 CCDC127Q96BQ5 260 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 IWS1Q96ST2 819 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 FAM118BQ9BPY3 351 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 ZSWIM1Q9BR11 485 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 ZNF577Q9BSK1 485 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 DDX18Q9NVP1 670 aaKnown RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 STX18Q9P2W9 335 aaKnown RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 HEY2Q9UBP5 337 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 UBR3Q6ZT12 1888 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 CLDN3O15551 220 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 VAV1P15498 845 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 PGM1P36871 562 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 DAB2IPQ5VWQ8 1189 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 OTOP1Q7RTM1 612 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 HAUS1Q96CS2 278 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 OLFM3Q96PB7 478 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 LXNQ9BS40 222 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 TRABDQ9H4I3 376 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 SIX2Q9NPC8 291 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 COL20A1Q9P218 1284 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 ANGPTL2Q9UKU9 493 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 FOXN3O00409 490 aaPredicted RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 PEX10O60683 326 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 OR6B1O95007 311 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 PENKP01210 267 aaPredicted RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 ATF2P15336 505 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 RPA3P35244 121 aaPredicted RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 SOX5P35711 763 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 PIK3CAP42336 1068 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 GSTA3Q16772 222 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 OTOAQ7RTW8 1153 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 NME8Q8N427 588 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 CEP70Q8NHQ1 597 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 NAT14Q8WUY8 206 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 AZIN2Q96A70 460 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 LENG1Q96BZ8 264 aaPredicted RBP13.41□□□□□ -0.26
DDR1-262ENST00000508312 MIS12Q9H081 205 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 PCDHA3Q9Y5H8 950 aa13.41□□□□□ -0.26
DDR1-262ENST00000508312 ARFGEF1Q9Y6D6 1849 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 ZMYM2Q9UBW7 1377 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 ADGRA3Q8IWK6 1321 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 MYO3BQ8WXR4 1341 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 ZBED4O75132 1171 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 OATP04181 439 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 ITGA2BP08514 1039 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 EIF2AK2P19525 551 aaKnown RBP13.4□□□□□ -0.26
DDR1-262ENST00000508312 CTNNA2P26232 953 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 MDH1BQ5I0G3 518 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 HYIQ5T013 277 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 CC2D2BQ6DHV5 1058 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 DPY19L2P1Q6NXN4 242 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 SATL1Q86VE3 508 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 SLC13A5Q86YT5 568 aaPredicted RBP13.4□□□□□ -0.26
DDR1-262ENST00000508312 SLC25A41Q8N5S1 370 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 NR1H4Q96RI1 486 aaPredicted RBP13.4□□□□□ -0.26
DDR1-262ENST00000508312 CBWD1Q9BRT8 395 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 UBE2TQ9NPD8 197 aaPredicted RBP13.4□□□□□ -0.26
DDR1-262ENST00000508312 FBXO6Q9NRD1 293 aaPredicted RBP13.4□□□□□ -0.26
DDR1-262ENST00000508312 NDE1Q9NXR1 346 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 ZNF212Q9UDV6 495 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 SLC4A7Q9Y6M7 1214 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.4□□□□□ -0.26
DDR1-262ENST00000508312 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
DDR1-262ENST00000508312 PGM3O95394 542 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 ASMTLO95671 621 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 CYP3A4P08684 503 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 MYCLP12524 364 aaPredicted RBP13.4□□□□□ -0.26
DDR1-262ENST00000508312 SFSWAPQ12872 951 aaKnown RBP13.4□□□□□ -0.26
DDR1-262ENST00000508312 MPP3Q13368 585 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 PLA2G4FQ68DD2 849 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 MAP7D3Q8IWC1 876 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 MKL1Q969V6 931 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 YIPF2Q9BWQ6 316 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 ZNF510Q9Y2H8 683 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 ZNF711Q9Y462 761 aa13.4□□□□□ -0.26
DDR1-262ENST00000508312 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
DDR1-262ENST00000508312 MIF4GDA9UHW6 222 aaKnown RBP13.39□□□□□ -0.27
DDR1-262ENST00000508312 RNASEH1O60930 286 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms