RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TRIM43BA6NCK2 446 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 MAPK13O15264 365 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 HTR3BO95264 441 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 POP4O95707 220 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 PLCG1P19174 1290 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 RPL6Q02878 288 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ZNF805Q5CZA5 627 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 CYP4A22Q5TCH4 519 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 TRAT1Q6PIZ9 186 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ADGRG6Q86SQ4 1221 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ZNF295-AS1Q8N0V1 137 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 CMTR1Q8N1G2 835 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 TRIM43Q96BQ3 446 aaPredicted RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 TTC25Q96NG3 672 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 HEPHQ9BQS7 1158 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 METTL22Q9BUU2 404 aaPredicted RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ISCUQ9H1K1 167 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 DDX4Q9NQI0 724 aaKnown RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 KANSL3Q9P2N6 904 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 ANAPC5Q9UJX4 755 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 WDR37Q9Y2I8 494 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 MED16Q9Y2X0 877 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 USP15Q9Y4E8 981 aaPredicted RBP8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 SAMD9Q5K651 1589 aa8.02□□□□□ -1.13
PDGFRA-206ENST00000508170 SNAPC4Q5SXM2 1469 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 MAP3K19Q56UN5 1328 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 PGRMC2O15173 223 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 KCNJ13O60928 360 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 REC8O95072 547 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 IL18RAPO95256 599 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 TUBB4AP04350 444 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 S100A9P06702 114 aaKnown RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 PRR35P0CG20 571 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 OSMP13725 252 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 ZNF3P17036 446 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 ABCD3P28288 659 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 GP5P40197 560 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 EIF2DP41214 584 aaKnown RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 TFAP4Q01664 338 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 CHRNDQ07001 517 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 DUSP28Q4G0W2 176 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 HSP90AA5PQ58FG0 334 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 FBXO48Q5FWF7 155 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 KCNT1Q5JUK3 1230 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 TANGO2Q6ICL3 276 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 SLC25A24Q6NUK1 477 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 LRSAM1Q6UWE0 723 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 HOOK3Q86VS8 718 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 UNC5CLQ8IV45 518 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 CCDC83Q8IWF9 413 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 HS6ST2Q96MM7 605 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 GAL3ST1Q99999 423 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 RIOK1Q9BRS2 568 aaKnown RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 OPA3Q9H6K4 179 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 ERVK-5Q9HDB9 667 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 ZNF335Q9H4Z2 1342 aaPredicted RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 A4D1N5 150 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 TGFBR3LH3BV60 316 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 KIAA0355O15063 1070 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 ADAM20O43506 726 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 TGM5O43548 720 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 KDM1AO60341 852 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 DNAJA2O60884 412 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 NDUFS2O75306 463 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 DXOO77932 396 aaKnown RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 ESRRAP11474 423 aaPredicted RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 PRKAR1BP31321 381 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 TCF7P36402 384 aaPredicted RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 ABCG1P45844 678 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 AMPHP49418 695 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 IDH3AP50213 366 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 DAG1Q14118 895 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 TARBP2Q15633 366 aaKnown RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 SMU1Q2TAY7 513 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 INTS6LQ5JSJ4 861 aaKnown RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 NBPF12Q5TAG4 269 aaPredicted RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 PTCRAQ6ISU1 281 aaPredicted RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 SLC30A9Q6PML9 568 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 RABEPKQ7Z6M1 372 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 P3H2Q8IVL5 708 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 SAMD11Q96NU1 681 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 CATSPER2Q96P56 530 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 KCTD15Q96SI1 283 aaPredicted RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 TBCDQ9BTW9 1192 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 OSBPL10Q9BXB5 764 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 RPRD1BQ9NQG5 326 aaKnown RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 CYP26B1Q9NR63 512 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 ABI2Q9NYB9 513 aaPredicted RBP8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 TEKT2Q9UIF3 430 aa8.01□□□□□ -1.13
PDGFRA-206ENST00000508170 FAM234BA2RU67 622 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 H3BNC9 293 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 VIMP08670 466 aaKnown RBP8□□□□□ -1.13
PDGFRA-206ENST00000508170 TPBGLP0DKB5 382 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 CCNA2P20248 432 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 AGXTP21549 392 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 BUD31P41223 144 aaPredicted RBP8□□□□□ -1.13
PDGFRA-206ENST00000508170 AFMP43652 599 aa8□□□□□ -1.13
PDGFRA-206ENST00000508170 CEBPAP49715 358 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms