RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 IRF7Q92985 503 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 SNX21Q969T3 373 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 DNAJC19Q96DA6 116 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 USP28Q96RU2 1077 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 RPP25Q9BUL9 199 aaKnown RBP15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 STRA6Q9BX79 667 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 TNMDQ9H2S6 317 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 TRPV5Q9NQA5 729 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 YIPF1Q9Y548 306 aa15.61■□□□□ 0.09
HMGCS1-203ENST00000507004 NOTCH4Q99466 2003 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 FRMD3A2A2Y4 597 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 MYMKA6NI61 221 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 ANKRD63C9JTQ0 380 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 MAN2B1O00754 1011 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 GCNT3O95395 438 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 NFICP08651 508 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 IDEP14735 1019 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 CEBPBP17676 345 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 CEBPZQ03701 1054 aaKnown RBP15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 VEPH1Q14D04 833 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 SV2CQ496J9 727 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 CENPPQ6IPU0 288 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 SYCP3Q8IZU3 236 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 SPATA18Q8TC71 538 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 MSANTD3Q96H12 275 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 ASB16Q96NS5 453 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 CLIC6Q96NY7 704 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 KXD1Q9BQD3 176 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 IER2Q9BTL4 223 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 TRMT61BQ9BVS5 477 aaKnown RBP15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 TRPV4Q9HBA0 871 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 DPP3Q9NY33 737 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 TIMM13Q9Y5L4 95 aaPredicted RBP15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 MYH15Q9Y2K3 1946 aa15.6■□□□□ 0.09
HMGCS1-203ENST00000507004 PTPRZ1P23471 2315 aaPredicted RBP15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 YEATS4O95619 227 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 GLULP15104 373 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 PSMC3P17980 439 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 MLLT6P55198 1093 aaPredicted RBP15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 SNW1Q13573 536 aaKnown RBP15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 SURF1Q15526 300 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 ATL3Q6DD88 541 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 ZNF852Q6ZMS4 543 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 C1orf210Q8IVY1 113 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 BRSK2Q8IWQ3 736 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 DCP1BQ8IZD4 617 aaKnown RBP15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 LINC00301Q8NCQ3 95 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 SPPL2BQ8TCT7 592 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 PYM1Q9BRP8 204 aaKnown RBP15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 BRD9Q9H8M2 597 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 MAGEF1Q9HAY2 307 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 PANK4Q9NVE7 773 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 DLGAP2Q9P1A6 1054 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 CEP72Q9P209 647 aa15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 R3HCC1Q9Y3T6 440 aaKnown RBP15.59■□□□□ 0.09
HMGCS1-203ENST00000507004 MTMR11A4FU01 709 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 PRR23AA6NEV1 266 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 CYB561D2O14569 222 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 SPTLC2O15270 562 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 MYL4P12829 197 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 GUCY2FP51841 1108 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 DUSP4Q13115 394 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 ARHGAP15Q53QZ3 475 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 FAM78AQ5JUQ0 283 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 TANGO2Q6ICL3 276 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 FAM173BQ6P4H8 233 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 IQUBQ8NA54 791 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 PSMG2Q969U7 264 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 KIAA1586Q9HCI6 787 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 LTB4R2Q9NPC1 389 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 FBXO4Q9UKT5 387 aa15.58■□□□□ 0.08
HMGCS1-203ENST00000507004 KPNA7A9QM74 516 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 EXTL3O43909 919 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 CUTAO60888 179 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 HSP90AA1P07900 732 aaKnown RBP15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 ADSSP30520 456 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 RPS9P46781 194 aaKnown RBP15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 SNRPFP62306 86 aaKnown RBP15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 UBXN2BQ14CS0 331 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 NFE2Q16621 373 aaPredicted RBP15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 ZNF528Q3MIS6 628 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 CRELD2Q6UXH1 353 aaPredicted RBP15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 FRMD5Q7Z6J6 570 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 MFSD6LQ8IWD5 586 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 HSCBQ8IWL3 235 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 LRRC52Q8N7C0 313 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 PGLYRP2Q96PD5 576 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 GCNAQ96QF7 691 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 ZCWPW1Q9H0M4 648 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 SLITRK6Q9H5Y7 841 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 OBP2AQ9NY56 170 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 RBAKQ9NYW8 714 aaPredicted RBP15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 ITGA11Q9UKX5 1188 aa15.57■□□□□ 0.08
HMGCS1-203ENST00000507004 FAM186AA6NE01 2351 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 FAM170BA6NMN3 283 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 SOBPA7XYQ1 873 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 ZNF263O14978 683 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 SPTLC1O15269 473 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 LAMTOR5O43504 91 aa15.56■□□□□ 0.08
HMGCS1-203ENST00000507004 DCNP07585 359 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms