RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 USP37Q86T82 979 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 CBWD2Q8IUF1 395 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 CSGALNACT2Q8N6G5 542 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 ZSWIM2Q8NEG5 633 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 APPL2Q8NEU8 664 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 SPATA20Q8TB22 786 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 LNX1Q8TBB1 728 aaPredicted RBP7.85□□□□□ -1.15
GYPB-206ENST00000506516 PIK3R5Q8WYR1 880 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 ANKRD36BP1Q96IX9 119 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 SUSD3Q96L08 255 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 OXCT2Q9BYC2 517 aaPredicted RBP7.85□□□□□ -1.15
GYPB-206ENST00000506516 SLC6A16Q9GZN6 736 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 KCTD10Q9H3F6 313 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 PDE11AQ9HCR9 933 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 DMAC2Q9NW81 257 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 CD207Q9UJ71 328 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 TRAF3IP3Q9Y228 551 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 FRMD4BQ9Y2L6 1034 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 NLRC5Q86WI3 1866 aa7.85□□□□□ -1.15
GYPB-206ENST00000506516 SPTBN5Q9NRC6 3674 aaKnown RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 COL4A4P53420 1690 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 ANO9A1A5B4 782 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 H3BQ06 376 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 I3L4J1 428 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 GLUD1P00367 558 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 F12P00748 615 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 NR3C1P04150 777 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 ITGB3P05106 788 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 KRT19P08727 400 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 TMEM191BP0C7N4 346 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 CCNYL3P0C7X3 344 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 DLATP10515 647 aaKnown RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 IGFBP6P24592 240 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 CTHP32929 405 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 PNPLA4P41247 253 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 BRCC3P46736 316 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 TAF6P49848 677 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 CLCN4P51793 760 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 AP3M2P53677 418 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 YWHAHQ04917 246 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 DLX2Q07687 328 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 CYP24A1Q07973 514 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 ADAM9Q13443 819 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 PSMD6Q15008 389 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 PSMD5Q16401 504 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 NFIL3Q16649 462 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 SV2CQ496J9 727 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 COBLL1Q53SF7 1204 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 CEP135Q66GS9 1140 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 PTCRAQ6ISU1 281 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 CES5AQ6NT32 575 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 ANKRD54Q6NXT1 300 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 PRSS55Q6UWB4 352 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 METTL23Q86XA0 190 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 PALB2Q86YC2 1186 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 WDR49Q8IV35 697 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 EFCAB13Q8IY85 973 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 C3orf58Q8NDZ4 430 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 SLC22A17Q8WUG5 538 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 HDAC7Q8WUI4 952 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 ERCC4Q92889 916 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 CCDC127Q96BQ5 260 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 DHTKD1Q96HY7 919 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 B3GALT6Q96L58 329 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 MFSD14AQ96MC6 490 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 ZNF560Q96MR9 790 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 TSG101Q99816 390 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 PLEKHA4Q9H4M7 779 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 INTS13Q9NVM9 706 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 DZANK1Q9NVP4 752 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 CLEC1BQ9P126 229 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 ITGA11Q9UKX5 1188 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 DSEQ9UL01 958 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 BARX2Q9UMQ3 279 aaPredicted RBP7.84□□□□□ -1.15
GYPB-206ENST00000506516 AGAP1Q9UPQ3 857 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 BACE2Q9Y5Z0 518 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 PRUNE2Q8WUY3 3088 aa7.84□□□□□ -1.15
GYPB-206ENST00000506516 REV3LO60673 3130 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 KPNA7A9QM74 516 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 M0QZQ0 153 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 CYB561D2O14569 222 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 PSMA7O14818 248 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 CETN3O15182 167 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 MAPK13O15264 365 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 TGM5O43548 720 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 GPR37L1O60883 481 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 PHACTR2O75167 634 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 TBX10O75333 385 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 GLP2RO95838 553 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 ODC1P11926 461 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 BMP1P13497 986 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 KRT13P13646 458 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 EPCAMP16422 314 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 RPL17P18621 184 aaKnown RBP7.83□□□□□ -1.16
GYPB-206ENST00000506516 NR2F2P24468 414 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 TKTP29401 623 aaKnown RBP7.83□□□□□ -1.16
GYPB-206ENST00000506516 POLR2BP30876 1174 aaKnown RBP7.83□□□□□ -1.16
GYPB-206ENST00000506516 ELF1P32519 619 aa7.83□□□□□ -1.16
GYPB-206ENST00000506516 OR1D2P34982 312 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms