RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 DEPDC1BQ8WUY9 529 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 RSPRY1Q96DX4 576 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 CCDC51Q96ER9 411 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 MSANTD3Q96H12 275 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 ZSWIM3Q96MP5 696 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 APOL6Q9BWW8 343 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 BARHL2Q9NY43 387 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 MTRRQ9UBK8 725 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 GIT1Q9Y2X7 761 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 DENND4CQ5VZ89 1909 aa7.78□□□□□ -1.16
VCAN-206ENST00000505615 ZNF638Q14966 1978 aaKnown RBP7.77□□□□□ -1.17
VCAN-206ENST00000505615 KNL1Q8NG31 2342 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 BCLAF3A2AJT9 711 aaKnown RBP7.77□□□□□ -1.17
VCAN-206ENST00000505615 MYBPHLA2RUH7 354 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 FAM221BA6H8Z2 402 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 SLC38A8A6NNN8 435 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 hCG_1984214I3L0E3 225 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 MSH4O15457 936 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 PRC1O43663 620 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 TADA2AO75478 443 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 MICAL2O94851 1124 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 CCDC192P0DO97 292 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 CALM1P0DP23 149 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 CALM2P0DP24 149 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 CALM3P0DP25 149 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 FGFR3P22607 806 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 IGFBP6P24592 240 aaPredicted RBP7.77□□□□□ -1.17
VCAN-206ENST00000505615 SFNP31947 248 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 OR1D2P34982 312 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 RFC5P40937 340 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 LIFRP42702 1097 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 SNRPNP63162 240 aaKnown RBP7.77□□□□□ -1.17
VCAN-206ENST00000505615 PDE4CQ08493 712 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 HDAC1Q13547 482 aaPredicted RBP7.77□□□□□ -1.17
VCAN-206ENST00000505615 DGKKQ5KSL6 1271 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 PLA2G4FQ68DD2 849 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 ANO5Q75V66 913 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 MICU3Q86XE3 530 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 CEP57Q86XR8 500 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 MFSD6LQ8IWD5 586 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 ZNF713Q8N859 430 aaPredicted RBP7.77□□□□□ -1.17
VCAN-206ENST00000505615 FANCBQ8NB91 859 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 GALNT6Q8NCL4 622 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 DEFB124Q8NES8 71 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 EXOC6Q8TAG9 804 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 SLC5A5Q92911 643 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 SMARCD2Q92925 531 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 GJA10Q969M2 543 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 CPB2Q96IY4 423 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 OXCT2Q9BYC2 517 aaPredicted RBP7.77□□□□□ -1.17
VCAN-206ENST00000505615 CSRNP2Q9H175 543 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 GLT8D2Q9H1C3 349 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 DUSP15Q9H1R2 295 aaPredicted RBP7.77□□□□□ -1.17
VCAN-206ENST00000505615 TRPV4Q9HBA0 871 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 ANKFY1Q9P2R3 1169 aa7.77□□□□□ -1.17
VCAN-206ENST00000505615 USP9XQ93008 2570 aaPredicted RBP7.77□□□□□ -1.17
VCAN-206ENST00000505615 MYO18AQ92614 2054 aaKnown RBP7.77□□□□□ -1.17
VCAN-206ENST00000505615 CEP192Q8TEP8 1941 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 PLXND1Q9Y4D7 1925 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 CASTOR2A6NHX0 329 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 CCDC69A6NI79 296 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 HEPACAM2A8MVW5 462 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 SPECC1L-ADORA2AF8WAN1 911 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 K7ELQ4 463 aaPredicted RBP7.76□□□□□ -1.17
VCAN-206ENST00000505615 ZNF263O14978 683 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 GAS7O60861 476 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 PSMD10O75832 226 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 CAVIN2O95810 425 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 FBXO45P0C2W1 286 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 SRGAP2CP0DJJ0 459 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 AKAP5P24588 427 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 NPEPPSP55786 919 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 LAMTOR4Q0VGL1 99 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 TUSC3Q13454 348 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 PON2Q15165 354 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 NAB2Q15742 525 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 C1orf228Q6PIY5 440 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 CASC1Q6TDU7 716 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 CD300LGQ6UXG3 332 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.76□□□□□ -1.17
VCAN-206ENST00000505615 NFXL1Q6ZNB6 911 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 TMTC2Q8N394 836 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 RDM1Q8NG50 284 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 PRPF31Q8WWY3 499 aaKnown RBP7.76□□□□□ -1.17
VCAN-206ENST00000505615 PSPC1Q8WXF1 523 aaKnown RBP7.76□□□□□ -1.17
VCAN-206ENST00000505615 TMEM143Q96AN5 459 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 RIT2Q99578 217 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 CORO1BQ9BR76 489 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 TEKT3Q9BXF9 490 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 KRTAP4-8Q9BYQ9 185 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 NUCKS1Q9H1E3 243 aaKnown RBP7.76□□□□□ -1.17
VCAN-206ENST00000505615 DHX33Q9H6R0 707 aaKnown RBP7.76□□□□□ -1.17
VCAN-206ENST00000505615 C8orf33Q9H7E9 229 aaPredicted RBP7.76□□□□□ -1.17
VCAN-206ENST00000505615 TMEM9BQ9NQ34 198 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 POLR3BQ9NW08 1133 aaPredicted RBP7.76□□□□□ -1.17
VCAN-206ENST00000505615 KLK14Q9P0G3 267 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 CDY1Q9Y6F8 540 aa7.76□□□□□ -1.17
VCAN-206ENST00000505615 CABIN1Q9Y6J0 2220 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 CITO14578 2027 aa7.75□□□□□ -1.17
VCAN-206ENST00000505615 ESYT2A0FGR8 921 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms