RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 CYP11B1P15538 503 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 CAPN2P17655 700 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 CYLC1P35663 651 aaPredicted RBP11.13□□□□□ -0.63
TPM3-217ENST00000504663 AARSP49588 968 aaKnown RBP eCLIP11.13□□□□□ -0.63
TPM3-217ENST00000504663 VAV2P52735 878 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 CDH8P55286 799 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 DSC1Q08554 894 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 BMS1Q14692 1282 aaKnown RBP11.13□□□□□ -0.63
TPM3-217ENST00000504663 ZNF667Q5HYK9 610 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 CHRDL2Q6WN34 429 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 SLC24A5Q71RS6 500 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 OSTM1Q86WC4 334 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 KBTBD7Q8WVZ9 684 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 AGPAT1Q99943 283 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 PAAF1Q9BRP4 392 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 FTHL17Q9BXU8 183 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 FAM117AQ9C073 453 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 ELOVL4Q9GZR5 314 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 TAS2R14Q9NYV8 317 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 ADAMTS1Q9UHI8 967 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 SALL4Q9UJQ4 1053 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 NAGPAQ9UK23 515 aa11.13□□□□□ -0.63
TPM3-217ENST00000504663 BZW2Q9Y6E2 419 aaKnown RBP11.13□□□□□ -0.63
TPM3-217ENST00000504663 NLRC5Q86WI3 1866 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 NRDCO43847 1150 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 EOMESO95936 686 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 MMEP08473 750 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 EN2P19622 333 aaPredicted RBP11.12□□□□□ -0.63
TPM3-217ENST00000504663 RAD23BP54727 409 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 CDR2Q01850 454 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 GRIK3Q13003 919 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 TSR1Q2NL82 804 aaKnown RBP11.12□□□□□ -0.63
TPM3-217ENST00000504663 WDR72Q3MJ13 1102 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 TMEM270Q6UE05 265 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 NECAB2Q7Z6G3 386 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 GLYCTKQ8IVS8 523 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 TFAP2BQ92481 460 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 APBB2Q92870 758 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 CCDC42Q96M95 316 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 MRPL45Q9BRJ2 306 aaKnown RBP11.12□□□□□ -0.63
TPM3-217ENST00000504663 IRX2Q9BZI1 471 aaPredicted RBP11.12□□□□□ -0.63
TPM3-217ENST00000504663 IMPG2Q9BZV3 1241 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 ELAC1Q9H777 363 aaKnown RBP11.12□□□□□ -0.63
TPM3-217ENST00000504663 CYP3A43Q9HB55 503 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 TMEM161AQ9NX61 479 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 GDAP2Q9NXN4 497 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
TPM3-217ENST00000504663 PCDHA13Q9Y5I0 950 aa11.12□□□□□ -0.63
TPM3-217ENST00000504663 PTPRDP23468 1912 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 F8W810 466 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 HCRTO43612 131 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 AKR1B10O60218 316 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 DDHD2O94830 711 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 CYP1A1P04798 512 aaPredicted RBP11.11□□□□□ -0.63
TPM3-217ENST00000504663 SKIP12755 728 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 UNGP13051 313 aaPredicted RBP11.11□□□□□ -0.63
TPM3-217ENST00000504663 KRT5P13647 590 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 CD58P19256 250 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 GATMP50440 423 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 CLCNKBP51801 687 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 LILRA4P59901 499 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 UPP1Q16831 310 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 SOWAHAQ2M3V2 549 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 TAF3Q5VWG9 929 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 FAM43BQ6ZT52 329 aaPredicted RBP11.11□□□□□ -0.63
TPM3-217ENST00000504663 FMNL3Q8IVF7 1028 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 HACE1Q8IYU2 909 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 RPUSD2Q8IZ73 545 aaKnown RBP11.11□□□□□ -0.63
TPM3-217ENST00000504663 SLC4A11Q8NBS3 891 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 SEPT8Q92599 483 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 PGBD4Q96DM1 585 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 CASD1Q96PB1 797 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 ISCUQ9H1K1 167 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 FAM124BQ9H5Z6 455 aaPredicted RBP11.11□□□□□ -0.63
TPM3-217ENST00000504663 RC3H2Q9HBD1 1191 aaKnown RBP11.11□□□□□ -0.63
TPM3-217ENST00000504663 HCSTQ9UBK5 93 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 L1RE1Q9UN81 338 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 PCDHB4Q9Y5E5 795 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 DUSP10Q9Y6W6 482 aa11.11□□□□□ -0.63
TPM3-217ENST00000504663 NCANO14594 1321 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 PATJQ8NI35 1801 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 CASTOR2A6NHX0 329 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 PODXLO00592 558 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 ZSCAN12O43309 604 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 XPOTO43592 962 aaKnown RBP11.1□□□□□ -0.63
TPM3-217ENST00000504663 TACC1O75410 805 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 PARNO95453 639 aaKnown RBP11.1□□□□□ -0.63
TPM3-217ENST00000504663 TIMP1P01033 207 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 POMCP01189 267 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 ITGB1P05556 798 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 THP07101 528 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 GNA15P30679 374 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 USP8P40818 1118 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 TAF6P49848 677 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 PDE6CP51160 858 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 NOMO3P69849 1222 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 PTP4A2Q12974 167 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 ORC1Q13415 861 aa11.1□□□□□ -0.63
TPM3-217ENST00000504663 TUSC3Q13454 348 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms