RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 SEC24CP53992 1094 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 RPS8P62241 208 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GSTO1P78417 241 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CREB5Q02930 508 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 GALNT1Q10472 559 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TRIM14Q14142 442 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PDIA6Q15084 440 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 C15orf59Q2T9L4 293 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PRR16Q569H4 304 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 NAALADL2Q58DX5 795 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SPATA1Q5VX52 437 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 MROH7Q68CQ1 1323 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 RANBP10Q6VN20 620 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 H2AFVQ71UI9 128 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 IFNL3Q8IZI9 196 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 REXO1Q8N1G1 1221 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ALLCQ8N6M5 410 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 SPATA5Q8NB90 893 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 MAP4K1Q92918 833 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 DDX27Q96GQ7 796 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TUBGCP5Q96RT8 1024 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 CYTH2Q99418 400 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 TRPC7Q9HCX4 862 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 MAN1C1Q9NR34 630 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 DDX43Q9NXZ2 648 aaKnown RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ARMCX3Q9UH62 379 aaPredicted RBP3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 KLHL3Q9UH77 587 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 NFU1Q9UMS0 254 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 EXOC7Q9UPT5 735 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 ZNF148Q9UQR1 794 aa3.88□□□□□ -1.79
PCDH11X-208ENST00000504220 hCG_2014768A0A024R1R8 64 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CYP3A7-CYP3A51PA0A087WV96 503 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 MEIS1O00470 390 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 FUCA1P04066 466 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PABPC1P11940 636 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 XRCC5P13010 732 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 GYS1P13807 737 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CYP3A7P24462 503 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TMOD1P28289 359 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 DNM2P50570 870 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 KCNJ2P63252 427 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 GCNT1Q02742 428 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 DHX9Q08211 1270 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 NNTQ13423 1086 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 NCAPHQ15003 741 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 NPTX1Q15818 432 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CCDC153Q494R4 210 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CERKLQ49MI3 558 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 FBXO43Q4G163 708 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 BRDTQ58F21 947 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 HP1BP3Q5SSJ5 553 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 RFX8Q6ZV50 586 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 FAM47EQ6ZV65 393 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 IFNLR1Q8IU57 520 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 APLFQ8IW19 511 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TEX9Q8N6V9 391 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 LINC00301Q8NCQ3 95 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 MCUQ8NE86 351 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 AENQ8WTP8 325 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 MAML1Q92585 1016 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 DDX12PQ92771 950 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SNF8Q96H20 258 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 DNAJC1Q96KC8 554 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SAMD11Q96NU1 681 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 GDF15Q99988 308 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 EPN3Q9H201 632 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CPNE7Q9UBL6 633 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 DKK3Q9UBP4 350 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ENOPH1Q9UHY7 261 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 HERC5Q9UII4 1024 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PCDHA12Q9UN75 941 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 DAAM1Q9Y4D1 1078 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 MAD1L1Q9Y6D9 718 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 KLRF2D3W0D1 207 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SPECC1L-ADORA2AF8WAN1 911 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 RGS13O14921 159 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ICMTO60725 284 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ZBED1O96006 694 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 RARAP10276 462 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TCEA1P23193 301 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 EEF1GP26641 437 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SERPINB6P35237 376 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 POU3F4P49335 361 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 GABREP78334 506 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 FOXK1P85037 733 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PPARAQ07869 468 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TRPC3Q13507 836 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SLC39A14Q15043 492 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PUM3Q15397 648 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 AARDQ4LEZ3 155 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 DHRS4L2Q6PKH6 230 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TOGARAM2Q6ZUX3 1019 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SH3BP5LQ7L8J4 393 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PALM2Q8IXS6 379 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 SYTL1Q8IYJ3 562 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 CARNMT1Q8N4J0 409 aa3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 ZBTB38Q8NAP3 1195 aaPredicted RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 TSEN2Q8NCE0 465 aaKnown RBP3.87□□□□□ -1.79
PCDH11X-208ENST00000504220 PNMA1Q8ND90 353 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms