RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 AJAP1Q9UKB5 411 aaPredicted RBP2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 ST3GAL5Q9UNP4 418 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 SIK3Q9Y2K2 1263 aa2.85□□□□□ -1.95
HMGB3P17-201ENST00000504195 A0A087X0B3 334 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 WDR27A2RRH5 827 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 FAM90A8PA6NJQ4 464 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 GOLGA8AA7E2F4 631 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 MYO1FO00160 1098 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 NEMP1O14524 444 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 PRSS23O95084 383 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 HNRNPCP07910 306 aaKnown RBP eCLIP2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 CHRM2P08172 466 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 TMEM191BP0C7N4 346 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 FAM90A13PP0C7W8 464 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 FAM90A24PP0C7X0 464 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 SLC6A2P23975 617 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 LINC00205P59089 165 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 SEMA3AQ14563 771 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 NOMO1Q15155 1222 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 RABEP1Q15276 862 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 MUM1Q2TAK8 710 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 ANO4Q32M45 955 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 SUPT20HL1Q3ZLR7 823 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 CEP78Q5JTW2 689 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 DDX46Q7L014 1031 aaKnown RBP2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 KIAA0907Q7Z7F0 614 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 SLC30A5Q8TAD4 765 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 TSPEARQ8WU66 669 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 TGFBRAP1Q8WUH2 860 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 CYFIP2Q96F07 1278 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 PBKQ96KB5 322 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 CTAGE1Q96RT6 745 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 ALG8Q9BVK2 526 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 QRSL1Q9H0R6 528 aaKnown RBP2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 FBXO34Q9NWN3 711 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 HSFX1Q9UBD0 423 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 SERGEFQ9UGK8 458 aa2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 APOBEC2Q9Y235 224 aaKnown RBP2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 MRPL42Q9Y6G3 142 aaKnown RBP2.84□□□□□ -1.95
HMGB3P17-201ENST00000504195 PRSS47A8MTI9 375 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 FAM171A2A8MVW0 826 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 WNT10BO00744 389 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 FGBP02675 491 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 HMGB1P09429 215 aaKnown RBP2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 DRD4P21917 467 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 THBS3P49746 956 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 CCT8P50990 548 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 MALLQ13021 153 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 LRRC41Q15345 812 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 ATP2B3Q16720 1220 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 SLC2A7Q6PXP3 512 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 UBE3BQ7Z3V4 1068 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 GALNT16Q8N428 558 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 NLGN4YQ8NFZ3 816 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 PRSS3P2Q8NHM4 247 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 UBE2Q2Q8WVN8 375 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 LPIN2Q92539 896 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 HOXB13Q92826 284 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 TMEM125Q96AQ2 219 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 ORAI2Q96SN7 254 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 LDAHQ9H6V9 325 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 SLC23A1Q9UHI7 598 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 SCOCQ9UIL1 159 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 AFG3L2Q9Y4W6 797 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 ACTL7AQ9Y615 435 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 NOTCH3Q9UM47 2321 aa2.83□□□□□ -1.96
HMGB3P17-201ENST00000504195 GPR32O75388 356 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 GSPT1P15170 499 aaKnown RBP2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 KCNA2P16389 499 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 FPR1P21462 350 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 SFPQP23246 707 aaKnown RBP eCLIP2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 GATA3P23771 443 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 ID4P47928 161 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 SLC5A3P53794 718 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 SCAND1P57086 179 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 NOMO3P69849 1222 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 CREMQ03060 361 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 PPP3CAQ08209 521 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 MGAT2Q10469 447 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 FAPQ12884 760 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 STRN3Q13033 797 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 DYRK1AQ13627 763 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 ERV3-1Q14264 604 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 HLXQ14774 488 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 KRT71Q3SY84 523 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 NOMO2Q5JPE7 1267 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 TOR2AQ5JU69 321 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 PRAMEF17Q5VTA0 474 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 TSHZ1Q6ZSZ6 1077 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 C18orf65Q6ZTR6 163 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 KCNK18Q7Z418 384 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 JAZF1Q86VZ6 243 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 B3GALNT2Q8NCR0 500 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 MYCBPAPQ8TBZ2 947 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 LMBR1Q8WVP7 490 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 TBC1D5Q92609 795 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 MYOCQ99972 504 aa2.82□□□□□ -1.96
HMGB3P17-201ENST00000504195 GSTO2Q9H4Y5 243 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms