RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 CCDC28BQ9BUN5 200 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 TEX12Q9BXU0 123 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 OSBPL8Q9BZF1 889 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 SRP68Q9UHB9 627 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 ZFP69BQ9UJL9 534 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 UBQLN1Q9UMX0 589 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 BCS1LQ9Y276 419 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 DRG1Q9Y295 367 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 AFG3L2Q9Y4W6 797 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 PCDHGC5Q9Y5F6 944 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 MEIS1O00470 390 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 CYP2D6P10635 497 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 ACADSP16219 412 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 NR2C2P49116 596 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 HNRNPH2P55795 449 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 CORO7P57737 925 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 PTENP60484 403 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 MAP3K10Q02779 954 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 GFPT1Q06210 699 aaPredicted RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 SLC20A2Q08357 652 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 STK4Q13043 487 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 PTK6Q13882 451 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 ZNF268Q14587 947 aaPredicted RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 BBS9Q3SYG4 887 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 MEI1Q5TIA1 1274 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 TIGD7Q6NT04 549 aaPredicted RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 HIBCHQ6NVY1 386 aaPredicted RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 POTEGQ6S5H5 508 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 RAD9BQ6WBX8 426 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 DSTYKQ6XUX3 929 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 JAMLQ86YT9 394 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 LZTR1Q8N653 840 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 SLC5A5Q92911 643 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 FAM149B1Q96BN6 582 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 PAGR1Q9BTK6 254 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 BEGAINQ9BUH8 593 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 NT5C1AQ9BXI3 368 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 C8orf4Q9NR00 106 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 PLXNA1Q9UIW2 1896 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 CYP2D7A0A087X1C5 515 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 RBM47A0AV96 593 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 TRIM49BA6NDI0 452 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 TRPC5OSA6NMA1 111 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 TIMM44O43615 452 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 STRNO43815 780 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 KDM1AO60341 852 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 GRIN3BO60391 1043 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 HSPA4LO95757 839 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 FAM163BP0C2L3 166 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 TGM2P21980 687 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 HTR7P34969 479 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 COILP38432 576 aaPredicted RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 CAP2P40123 477 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 RANBP1P43487 201 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 GCLMP48507 274 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 RAB27AP51159 221 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 AIF1P55008 147 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 MAGOHP61326 146 aaKnown RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 VSNL1P62760 191 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 KRT17Q04695 432 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 GABPAQ06546 454 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 TTC39BQ5VTQ0 682 aaPredicted RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 TMEM270Q6UE05 265 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 C4orf50Q6ZRC1 276 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 NUDT18Q6ZVK8 323 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 SLC35G2Q8TBE7 412 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 GPBP1L1Q9HC44 474 aaPredicted RBP4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 PCDH9Q9HC56 1237 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 CTNNAL1Q9UBT7 734 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 BLOC1S6Q9UL45 172 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 LRFN2Q9ULH4 789 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 LTBP2Q14767 1821 aa4.99□□□□□ -1.61
NDFIP1-202ENST00000503388 TMEM247A6NEH6 219 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 NCANO14594 1321 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TRDMT1O14717 391 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SLC16A4O15374 487 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SMIM24O75264 130 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TOM1L1O75674 476 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 MCF2P10911 925 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 FECHP22830 423 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 RXRGP48443 463 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 CDK7P50613 346 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TMPRSS15P98073 1019 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 CCDC15Q0P6D6 951 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 ELAVL2Q12926 359 aaKnown RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 SNAPC2Q13487 334 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 NCOA4Q13772 614 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 EMC2Q15006 297 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TAF11Q15544 211 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 AP1ARQ63HQ0 302 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 TRIM65Q6PJ69 517 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 USP17L6PQ6QN14 398 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 RAPH1Q70E73 1250 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 ZNF410Q86VK4 478 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 ANKRD13AQ8IZ07 590 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 PCYOX1LQ8NBM8 494 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 LZICQ8WZA0 190 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 MAGEB10Q96LZ2 347 aaPredicted RBP4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 WDR24Q96S15 920 aa4.98□□□□□ -1.61
NDFIP1-202ENST00000503388 FAM213AQ9BRX8 229 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms