RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 CHGBP05060 677 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 RARBP10826 455 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 SOX6P35712 828 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 SLC26A3P40879 764 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 PIP4K2AP48426 406 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 ST13P50502 369 aaKnown RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 FOXK1P85037 733 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 PPP2R2BQ00005 443 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 KIF23Q02241 960 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 ZBTB16Q05516 673 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 TRIM14Q14142 442 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 DSC3Q14574 896 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 CLUL1Q15846 466 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 WSCD2Q2TBF2 565 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 AARS2Q5JTZ9 985 aaKnown RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 KRBOX4Q5JUW0 171 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 C12orf60Q5U649 245 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 PRR5LQ6MZQ0 368 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 ERAP2Q6P179 960 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 TRIM65Q6PJ69 517 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 KDM7AQ6ZMT4 941 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 USP50Q70EL3 339 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 LIMS2Q7Z4I7 341 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 TREML1Q86YW5 311 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 CCNJLQ8IV13 435 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 MMAAQ8IVH4 418 aaKnown RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 IFT20Q8IY31 132 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 ZBED8Q8IZ13 594 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 SLC38A6Q8IZM9 456 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 ELMOD1Q8N336 334 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 CCDC24Q8N4L8 307 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 TTLL6Q8N841 843 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 MYCBPAPQ8TBZ2 947 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 TEX47Q8TBZ9 253 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 COG1Q8WTW3 980 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 TTC9Q92623 222 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 COX4I2Q96KJ9 171 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 FBXL18Q96ME1 805 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 NUDCD1Q96RS6 583 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 SDF4Q9BRK5 362 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 TRIM15Q9C019 465 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 PITHD1Q9GZP4 211 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 NTN4Q9HB63 628 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 PAQR5Q9NXK6 330 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 GIN1Q9NXP7 522 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 ABI2Q9NYB9 513 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 ZNHIT2Q9UHR6 403 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 SLC8A2Q9UPR5 921 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 MED16Q9Y2X0 877 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 RRP7AQ9Y3A4 280 aaKnown RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 CBY1Q9Y3M2 126 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 SPEF1Q9Y4P9 236 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 SNCAIPQ9Y6H5 919 aa6.87□□□□□ -1.31
CLCN3-203ENST00000502998 COL11A2P13942 1736 aaPredicted RBP6.87□□□□□ -1.31
CLCN3-203ENST00000502998 SH3PXD2BA1X283 911 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 C5orf60A6NFR6 353 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 GLTPD2A6NH11 291 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 NFKBIEO00221 500 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 DNM1LO00429 736 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 BET1O15155 118 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 SLC22A1O15245 554 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 ALOX15BO15296 676 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 HOXC11O43248 304 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 NDUFA2O43678 99 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 PPP1R37O75864 691 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 MICAL2O94851 1124 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 PABPC1P11940 636 aaKnown RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 CKBP12277 381 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 EEF2P13639 858 aaKnown RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 P4HA1P13674 534 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 TNFAIP3P21580 790 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 DNAJB1P25685 340 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 EEF1GP26641 437 aaKnown RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 NUDT1P36639 197 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 LONP1P36776 959 aaKnown RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 PTDSS1P48651 473 aaKnown RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 TUBP50607 506 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 HNRNPFP52597 415 aaKnown RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 ARFIP2P53365 341 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 IST1P53990 364 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 CSNK2BP67870 215 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 NOP14P78316 857 aaKnown RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 ENPEPQ07075 957 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 SLFN5Q08AF3 891 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 C19orf57Q0VDD7 668 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 CDC20Q12834 499 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 MAP3K12Q12852 859 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 RALGDSQ12967 914 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 DHX34Q14147 1143 aaKnown RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 SKIDA1Q1XH10 827 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 SETMARQ53H47 684 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 VWA5B1Q5TIE3 1220 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 OLFML2BQ68BL8 750 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 MZT2BQ6NZ67 158 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 PNMA8AQ86V59 439 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-203ENST00000502998 SULF1Q8IWU6 871 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 ARFGAP2Q8N6H7 521 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 OR52K1Q8NGK4 314 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 CEP70Q8NHQ1 597 aa6.86□□□□□ -1.31
CLCN3-203ENST00000502998 CCT6BQ92526 530 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms