RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 LETM1O95202 739 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-228ENST00000498814 VNN1O95497 513 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 GLP2RO95838 553 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 GCLMP48507 274 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 MYL6P60660 151 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 NCOA4Q13772 614 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 STX1AQ16623 288 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 CCDC40Q4G0X9 1142 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 CTXN3Q4LDR2 81 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 SLC8B1Q6J4K2 584 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 ZNF280DQ6N043 979 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 VN1R2Q8NFZ6 395 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 SLC35C1Q96A29 364 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 XYLT2Q9H1B5 865 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 UBE2ZQ9H832 354 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-228ENST00000498814 VRTNQ9H8Y1 702 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 TMEM8AQ9HCN3 771 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 CLDND1Q9NY35 253 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 SNX9Q9Y5X1 595 aa16.73■□□□□ 0.27
CPNE1-228ENST00000498814 SRGAP2BP0DMP2 458 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 CCDC192P0DO97 292 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 LTBRP36941 435 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 RAB33AQ14088 237 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 SGSM1Q2NKQ1 1148 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 DCAF17Q5H9S7 520 aaPredicted RBP16.72■□□□□ 0.27
CPNE1-228ENST00000498814 TCERG1LQ5VWI1 586 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 KRT39Q6A163 491 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 OVOS1Q6IE37 1185 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 LILRA6Q6PI73 481 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 RSPO2Q6UXX9 243 aaPredicted RBP16.72■□□□□ 0.27
CPNE1-228ENST00000498814 DPH6Q7L8W6 267 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 LIMS2Q7Z4I7 341 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 METTL23Q86XA0 190 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 TOP6BLQ8N6T0 577 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 SPATA18Q8TC71 538 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 TAF4BQ92750 862 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 CASP10Q92851 521 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 FBXL5Q9UKA1 691 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 CDY1Q9Y6F8 540 aa16.72■□□□□ 0.27
CPNE1-228ENST00000498814 OR6C75A6NL08 312 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 ADAM12O43184 909 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 SLC34A2O95436 690 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 GLUD1P00367 558 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 HLA-DRAP01903 254 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 EPCAMP16422 314 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 OR1D2P34982 312 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 RBM10P98175 930 aaKnown RBP16.71■□□□□ 0.27
CPNE1-228ENST00000498814 TYRO3Q06418 890 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 TPD52L1Q16890 204 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-228ENST00000498814 WDR72Q3MJ13 1102 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 WSCD1Q658N2 575 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 LLGL2Q6P1M3 1020 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 PALB2Q86YC2 1186 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 IRF2BP1Q8IU81 584 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 GLYCTKQ8IVS8 523 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 TMEM86AQ8N2M4 240 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 PDCL2Q8N4E4 241 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 HDAC7Q8WUI4 952 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 THAP9Q9H5L6 903 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 MMRN2Q9H8L6 949 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 PRDM6Q9NQX0 595 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 CLEC1BQ9P126 229 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 L1RE1Q9UN81 338 aa16.71■□□□□ 0.27
CPNE1-228ENST00000498814 TGM5O43548 720 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 TBX10O75333 385 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 ASS1P00966 412 aaKnown RBP16.7■□□□□ 0.26
CPNE1-228ENST00000498814 FAM163BP0C2L3 166 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 PIK3CAP42336 1068 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 MXI1P50539 228 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 DLX2Q07687 328 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-228ENST00000498814 NFKBIBQ15653 356 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 SOWAHAQ2M3V2 549 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 ZNF699Q32M78 642 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 EP400NLQ6ZTU2 488 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 C11orf57Q6ZUT1 292 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-228ENST00000498814 THEM5Q8N1Q8 247 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 ENOX1Q8TC92 643 aaKnown RBP16.7■□□□□ 0.26
CPNE1-228ENST00000498814 TAS1R2Q8TE23 839 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 MSLNLQ96KJ4 702 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 CNOT6LQ96LI5 555 aaKnown RBP16.7■□□□□ 0.26
CPNE1-228ENST00000498814 PLEKHA4Q9H4M7 779 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 DZANK1Q9NVP4 752 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 THEGQ9P2T0 379 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 DPP7Q9UHL4 492 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 COQ4Q9Y3A0 265 aa16.7■□□□□ 0.26
CPNE1-228ENST00000498814 GABRDO14764 452 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 PMM2O15305 246 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 TACC1O75410 805 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 ABLIM3O94929 683 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 HOXB8P17481 243 aaPredicted RBP16.69■□□□□ 0.26
CPNE1-228ENST00000498814 KCNA5P22460 613 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 TNNC1P63316 161 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 ROR1Q01973 937 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 CBWD6Q4V339 395 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 ZNF667Q5HYK9 610 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 CBWD3Q5JTY5 395 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 CBWD5Q5RIA9 395 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 TPGS2Q68CL5 300 aa16.69■□□□□ 0.26
CPNE1-228ENST00000498814 ANKRD54Q6NXT1 300 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms