RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 TMEM95Q3KNT9 176 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 MIIPQ5JXC2 388 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 METTL21CQ5VZV1 264 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 HHIPL2Q6UWX4 724 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 IZUMO2Q6UXV1 221 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SLC30A10Q6XR72 485 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 RNF111Q6ZNA4 994 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 C4orf50Q6ZRC1 276 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 RAPH1Q70E73 1250 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 NEK8Q86SG6 692 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CABP7Q86V35 215 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SLC25A41Q8N5S1 370 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCDC89Q8N998 374 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 Q8N9G6 341 aaPredicted RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 PRPF31Q8WWY3 499 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CLPTM1LQ96KA5 538 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CTAGE1Q96RT6 745 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 TXLNGYQ9BZA5 131 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SENP6Q9GZR1 1112 aaPredicted RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 VCX3BQ9H321 246 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 VCX3AQ9NNX9 186 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 BARHL2Q9NY43 387 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 FAM198AQ9UFP1 575 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 GRID1Q9ULK0 1009 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 COMMD3-BMI1R4GMX3 469 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 PDS5AQ29RF7 1337 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 A6NJY4 79 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 LRRC53A6NM62 1247 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 BHMG1C9JSJ3 638 aaPredicted RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SORBS2O94875 1100 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 BMP15O95972 392 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 POTEIP0CG38 1075 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 POTEJP0CG39 1038 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZBTB48P10074 688 aaPredicted RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CETPP11597 493 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 KCNA2P16389 499 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CALCRLQ16602 461 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 TMEM266Q2M3C6 531 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SLC35G1Q2M3R5 365 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CMPK2Q5EBM0 449 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 GRAMD4Q6IC98 578 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 KLHDC10Q6PID8 442 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 MARK2Q7KZI7 788 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 KRT25Q7Z3Z0 450 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 FLCNQ8NFG4 579 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 ACER1Q8TDN7 264 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CENPTQ96BT3 561 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 HAUS1Q96CS2 278 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CALML4Q96GE6 196 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SERINC2Q96SA4 455 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 ASCC2Q9H1I8 757 aaPredicted RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 LRMDAQ9H2I8 198 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 CCSER2Q9H7U1 834 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 UTP6Q9NYH9 597 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 SELENONQ9NZV5 590 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 POLG2Q9UHN1 485 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 DACH1Q9UI36 760 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZNF148Q9UQR1 794 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 AFG3L2Q9Y4W6 797 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 TNRC6CQ9HCJ0 1690 aaKnown RBP6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 GAKO14976 1311 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 RPTORQ8N122 1335 aa6.11□□□□□ -1.43
SOX2-OT-218ENST00000498731 KANSL1LA0AUZ9 987 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 TMEM120BA0PK00 339 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 GRID2IPA4D2P6 1211 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 POTEMA6NI47 508 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ANKRD63C9JTQ0 380 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 DDX39AO00148 427 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ENPP3O14638 875 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 RHOBTB3O94955 611 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ZBTB11O95625 1053 aaPredicted RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 GSTA2P09210 222 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 PORP16435 677 aaPredicted RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 PRLRP16471 622 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ENDOUP21128 410 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 SLC5A2P31639 672 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 CYLC1P35663 651 aaPredicted RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ARID5AQ03989 594 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 RELAQ04206 551 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 EFTUD2Q15029 972 aaKnown RBP eCLIP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 QRICH1Q2TAL8 776 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 PLEKHG4Q58EX7 1191 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 IL31Q6EBC2 164 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 FBXL19Q6PCT2 694 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ELMSAN1Q6PJG2 1045 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 C15orf52Q6ZUT6 534 aaKnown RBP6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 FAM186BQ8IYM0 893 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 RTKN2Q8IZC4 609 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 GLIS3Q8NEA6 775 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 ACTRT2Q8TDY3 377 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 PWWP2AQ96N64 755 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 SACM1LQ9NTJ5 587 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 TSC22D4Q9Y3Q8 395 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 GPSM3Q9Y4H4 160 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 TLL2Q9Y6L7 1015 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 IRS2Q9Y4H2 1338 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 GOLGA6L10A0A0M3HER8 536 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 E7ENQ6 273 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 TLR2O60603 784 aa6.1□□□□□ -1.43
SOX2-OT-218ENST00000498731 PRMT3O60678 531 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms