RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 PTPN2P17706 415 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 CCND2P30279 289 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 GALK1P51570 392 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 HSD17B4P51659 736 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 PLCB2Q00722 1185 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 RPL6Q02878 288 aaKnown RBP5.36□□□□□ -1.55
CSTF1-207ENST00000498689 PSMD2Q13200 908 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 CLCA4Q14CN2 919 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 SBK1Q52WX2 424 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 STXBP5Q5T5C0 1151 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 FHL5Q5TD97 284 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 FBXL19Q6PCT2 694 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 STOX1Q6ZVD7 989 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 WWC1Q8IX03 1113 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 COLGALT2Q8IYK4 626 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 ZNF511Q8NB15 262 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 PRR7Q8TB68 274 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 ZNF564Q8TBZ8 553 aaPredicted RBP5.36□□□□□ -1.55
CSTF1-207ENST00000498689 TMEM175Q9BSA9 504 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 AMNQ9BXJ7 453 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 KDM4CQ9H3R0 1056 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 ARPP21Q9UBL0 812 aaPredicted RBP5.36□□□□□ -1.55
CSTF1-207ENST00000498689 STK39Q9UEW8 545 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 PCDHB1Q9Y5F3 818 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 ANAPC1Q9H1A4 1944 aa5.36□□□□□ -1.55
CSTF1-207ENST00000498689 RP1P56715 2156 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 A0A087X0B3 334 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 PNMA6EA0A0J9YXQ4 647 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 A0A1W2PQD8 194 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 GSG1L2A8MUP6 293 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 FLRT2O43155 660 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 NADKO95544 446 aaPredicted RBP5.35□□□□□ -1.55
CSTF1-207ENST00000498689 LRG1P02750 347 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 TIMP2P16035 220 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 GNLYP22749 145 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 VARSP26640 1264 aaKnown RBP5.35□□□□□ -1.55
CSTF1-207ENST00000498689 DPP6P42658 865 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 CD97P48960 835 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 SEC13P55735 322 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 SCRN1Q12765 414 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 ARID5BQ14865 1188 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 TEAD2Q15562 447 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 HLA-BQ31612 363 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 USP41Q3LFD5 358 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 ITPRIPL2Q3MIP1 535 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 TRIM68Q6AZZ1 485 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 FUT10Q6P4F1 479 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 SPNS3Q6ZMD2 512 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 CXXC5Q7LFL8 322 aaKnown RBP5.35□□□□□ -1.55
CSTF1-207ENST00000498689 CCDC33Q8N5R6 958 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 EAF2Q96CJ1 260 aaPredicted RBP5.35□□□□□ -1.55
CSTF1-207ENST00000498689 VCPIP1Q96JH7 1222 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 HSPA12BQ96MM6 686 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 ZNF578Q96N58 590 aaPredicted RBP5.35□□□□□ -1.55
CSTF1-207ENST00000498689 INPP4AQ96PE3 977 aaPredicted RBP5.35□□□□□ -1.55
CSTF1-207ENST00000498689 FAM193BQ96PV7 902 aaPredicted RBP5.35□□□□□ -1.55
CSTF1-207ENST00000498689 MEIS3Q99687 375 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 POLR3CQ9BUI4 534 aaPredicted RBP5.35□□□□□ -1.55
CSTF1-207ENST00000498689 DPH1Q9BZG8 443 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 UBA5Q9GZZ9 404 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 SMARCAD1Q9H4L7 1026 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 EPB41L4AQ9HCS5 686 aaPredicted RBP5.35□□□□□ -1.55
CSTF1-207ENST00000498689 HPS4Q9NQG7 708 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.35□□□□□ -1.55
CSTF1-207ENST00000498689 EVA1BQ9NVM1 165 aa5.35□□□□□ -1.55
CSTF1-207ENST00000498689 ARHGAP10A1A4S6 786 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 ZBTB42B2RXF5 422 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 GOLIM4O00461 696 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 KCNK3O14649 394 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 AP5Z1O43299 807 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 ADH1CP00326 375 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 PRKCGP05129 697 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 ZNF883P0CG24 379 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 GOLGA8HP0CJ92 632 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 ADD2P35612 726 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 NLRP11P59045 1033 aaKnown RBP5.34□□□□□ -1.55
CSTF1-207ENST00000498689 CDC37Q16543 378 aaPredicted RBP5.34□□□□□ -1.55
CSTF1-207ENST00000498689 TBR1Q16650 682 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 ZSCAN23Q3MJ62 389 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 SPDYCQ5MJ68 293 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 CAPRIN2Q6IMN6 1127 aaKnown RBP5.34□□□□□ -1.55
CSTF1-207ENST00000498689 TMED8Q6PL24 325 aaPredicted RBP5.34□□□□□ -1.55
CSTF1-207ENST00000498689 KDM7AQ6ZMT4 941 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 FAM43BQ6ZT52 329 aaPredicted RBP5.34□□□□□ -1.55
CSTF1-207ENST00000498689 PRIMA1Q86XR5 153 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 TRIML1Q8N9V2 468 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 LNX1Q8TBB1 728 aaPredicted RBP5.34□□□□□ -1.55
CSTF1-207ENST00000498689 PDCD6IPQ8WUM4 868 aaKnown RBP5.34□□□□□ -1.55
CSTF1-207ENST00000498689 SEPT1Q8WYJ6 367 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 SPACA7Q96KW9 195 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 PUS7LQ9H0K6 701 aaKnown RBP5.34□□□□□ -1.55
CSTF1-207ENST00000498689 ZDHHC4Q9NPG8 344 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 CD93Q9NPY3 652 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 ASCL3Q9NQ33 180 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 MIOSQ9NXC5 875 aa5.34□□□□□ -1.55
CSTF1-207ENST00000498689 MAN1A2O60476 641 aa5.33□□□□□ -1.56
CSTF1-207ENST00000498689 RECQL4O94761 1208 aa5.33□□□□□ -1.56
CSTF1-207ENST00000498689 KRT7P08729 469 aa5.33□□□□□ -1.56
CSTF1-207ENST00000498689 PDHBP11177 359 aa5.33□□□□□ -1.56
CSTF1-207ENST00000498689 KCNA2P16389 499 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms