RNA–Protein interactions for RNA: ENST00000498641.1

GPATCH4-209, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-209ENST00000498641 BCO2Q9BYV7 579 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 PPP1R12CQ9BZL4 782 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 DNAI2Q9GZS0 605 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 HIPK3Q9H422 1215 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 C11orf49Q9H6J7 331 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 SMYD3Q9H7B4 428 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 GOLGA2P5Q9HBQ8 144 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 TMEM39AQ9NV64 488 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 INTUQ9ULD6 942 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 CNTN6Q9UQ52 1028 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 INPP5FQ9Y2H2 1132 aa7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.59□□□□□ -1.19
GPATCH4-209ENST00000498641 ANO9A1A5B4 782 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 CTAGE9A4FU28 777 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 ANKRD62A6NC57 917 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 KPNA7A9QM74 516 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 MED7O43513 233 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 BUB1O43683 1085 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 HUS1O60921 280 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 NBNO60934 754 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 URI1O94763 535 aaPredicted RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 PARNO95453 639 aaKnown RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 EOMESO95936 686 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 POMCP01189 267 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 PAEPP09466 180 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 TMEM253P0C7T8 217 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 COL6A1P12109 1028 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 GZMAP12544 262 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 BRD2P25440 801 aaKnown RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 SSTR3P32745 418 aaPredicted RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 RPL9P32969 192 aaKnown RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 NSFP46459 744 aaKnown RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 MNX1P50219 401 aaPredicted RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 ZNF132P52740 706 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 NDST1P52848 882 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 CCL23P55773 120 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 SOX4Q06945 474 aaPredicted RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 FAAP100Q0VG06 881 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 CLEC16AQ2KHT3 1053 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 PLEKHG4Q58EX7 1191 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 ACAD10Q6JQN1 1059 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 GLB1LQ6UWU2 654 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 TRIM72Q6ZMU5 477 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 DPH6Q7L8W6 267 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 RTN4RL1Q86UN2 441 aaPredicted RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 PALB2Q86YC2 1186 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 RNF10Q8N5U6 811 aaKnown RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 APPL2Q8NEU8 664 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 DBF4BQ8NFT6 615 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 TRIM58Q8NG06 486 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 URGCPQ8TCY9 931 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 ZNF606Q8WXB4 792 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 CPA5Q8WXQ8 436 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 DDX1Q92499 740 aaKnown RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 APBB2Q92870 758 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 TMEM176AQ96HP8 235 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 SCLYQ96I15 445 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 PAWRQ96IZ0 340 aaKnown RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 NAPGQ99747 312 aaPredicted RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 NT5C1AQ9BXI3 368 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 SDCBP2Q9H190 292 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 TSPYL2Q9H2G4 693 aaPredicted RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 SNX25Q9H3E2 840 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 FAM124BQ9H5Z6 455 aaPredicted RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 MIOSQ9NXC5 875 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 TAS2R14Q9NYV8 317 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 LRFN2Q9ULH4 789 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 BARX2Q9UMQ3 279 aaPredicted RBP7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 NENFQ9UMX5 172 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 CEP83Q9Y592 693 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 PCDHB7Q9Y5E2 793 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 CEP350Q5VT06 3117 aa7.58□□□□□ -1.2
GPATCH4-209ENST00000498641 CASTOR2A6NHX0 329 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 BTNL10A8MVZ5 291 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 A8MXQ7 604 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 C9IYK1 514 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 PODXLO00592 558 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 CYB561D2O14569 222 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 ENPP3O14638 875 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 SPTLC1O15269 473 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 CILPO75339 1184 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 CAPN2P17655 700 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 LRPAP1P30533 357 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 CYP2C18P33260 490 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 GNL1P36915 607 aaPredicted RBP7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 AFF1P51825 1210 aaKnown RBP7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 RAD23BP54727 409 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 LILRA4P59901 499 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 GPC5P78333 572 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 FAM189BP81408 668 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 GRIK3Q13003 919 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 ORC1Q13415 861 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 SGO2Q562F6 1265 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 LIN9Q5TKA1 542 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 C1orf53Q5VUE5 145 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 NAA35Q5VZE5 725 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 PPP1R2P3Q6NXS1 205 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 DSTYKQ6XUX3 929 aa7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 FAM43BQ6ZT52 329 aaPredicted RBP7.57□□□□□ -1.2
GPATCH4-209ENST00000498641 NECAB2Q7Z6G3 386 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms