RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 LACRTQ9GZZ8 138 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 TRPV6Q9H1D0 765 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 LHX5Q9H2C1 402 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 SNX25Q9H3E2 840 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 ELAC1Q9H777 363 aaKnown RBP9.01□□□□□ -0.97
SF3A1-210ENST00000498259 RSAD1Q9HA92 442 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 APOBEC3GQ9HC16 384 aaKnown RBP9.01□□□□□ -0.97
SF3A1-210ENST00000498259 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.01□□□□□ -0.97
SF3A1-210ENST00000498259 RGS18Q9NS28 235 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 GDAP2Q9NXN4 497 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 SIX4Q9UIU6 781 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 AJAP1Q9UKB5 411 aaPredicted RBP9.01□□□□□ -0.97
SF3A1-210ENST00000498259 GTF3C4Q9UKN8 822 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 DSEQ9UL01 958 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 PCDHGC3Q9UN70 934 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 SAR1BQ9Y6B6 198 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 SCINQ9Y6U3 715 aa9.01□□□□□ -0.97
SF3A1-210ENST00000498259 KPNA7A9QM74 516 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 PIRO00625 290 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 SLU7O95391 586 aaKnown RBP9□□□□□ -0.97
SF3A1-210ENST00000498259 MMEP08473 750 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 PNMA6AP0CW24 399 aaPredicted RBP9□□□□□ -0.97
SF3A1-210ENST00000498259 CD19P15391 556 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 RFC2P35250 354 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 PAFAH1B1P43034 410 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 ASPAP45381 313 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 ZNF132P52740 706 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 C1QBPQ07021 282 aaKnown RBP9□□□□□ -0.97
SF3A1-210ENST00000498259 INCA1Q0VD86 236 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 GRIK3Q13003 919 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 CLEC16AQ2KHT3 1053 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 SGO2Q562F6 1265 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 TAF3Q5VWG9 929 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 METTL23Q86XA0 190 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 FAM126BQ8IXS8 530 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 SLC35F6Q8N357 371 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 TOP6BLQ8N6T0 577 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 PPP1R13LQ8WUF5 828 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 KAT5Q92993 513 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 ARMC5Q96C12 935 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 HEXIM2Q96MH2 286 aaKnown RBP9□□□□□ -0.97
SF3A1-210ENST00000498259 FAM193BQ96PV7 902 aaPredicted RBP9□□□□□ -0.97
SF3A1-210ENST00000498259 ARID3AQ99856 593 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 CRISPLD2Q9H0B8 497 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 TSPYL2Q9H2G4 693 aaPredicted RBP9□□□□□ -0.97
SF3A1-210ENST00000498259 AGO3Q9H9G7 860 aaKnown RBP9□□□□□ -0.97
SF3A1-210ENST00000498259 L2HGDHQ9H9P8 463 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 CTTNBP2NLQ9P2B4 639 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 WDR35Q9P2L0 1181 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 CDC23Q9UJX2 597 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 HES2Q9Y543 173 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 PCDHGC5Q9Y5F6 944 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 SNX9Q9Y5X1 595 aa9□□□□□ -0.97
SF3A1-210ENST00000498259 ARL5CA6NH57 179 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 TMCO5BA8MYB1 307 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 MIF4GDA9UHW6 222 aaKnown RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 CES2O00748 559 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 TRAPPC3O43617 180 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 CILPO75339 1184 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 MOCS3O95396 460 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 TUBBP07437 444 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 WEE2P0C1S8 567 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 ABCB4P21439 1286 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 GNL1P36915 607 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 SLC1A1P43005 524 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 LHX1P48742 406 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 FMO1Q01740 532 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 CENPCQ03188 943 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 DSC3Q14574 896 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 RPS6KA1Q15418 735 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 CNGA2Q16280 664 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 CCDC181Q5TID7 509 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 PAPD7Q5XG87 772 aaKnown RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 SLC39A5Q6ZMH5 540 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 PEX26Q7Z412 305 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 DAAM2Q86T65 1068 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 ECHDC2Q86YB7 292 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 PHF13Q86YI8 300 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 UBL4BQ8N7F7 174 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 MYRIPQ8NFW9 859 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 LNX1Q8TBB1 728 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 SLC35G2Q8TBE7 412 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 IPO4Q8TEX9 1081 aaKnown RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 SLC20A1Q8WUM9 679 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 DDX1Q92499 740 aaKnown RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 ZNF333Q96JL9 665 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 ZMAT2Q96NC0 199 aaKnown RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 PPP1R10Q96QC0 940 aaKnown RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 WDR24Q96S15 920 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 NAP1L3Q99457 506 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 SYNCQ9H7C4 482 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 AVENQ9NQS1 362 aaPredicted RBP8.99□□□□□ -0.97
SF3A1-210ENST00000498259 PARVAQ9NVD7 372 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 TMEM161AQ9NX61 479 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 KLK14Q9P0G3 267 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 ADAM22Q9P0K1 906 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 HESX1Q9UBX0 185 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 AMFRQ9UKV5 643 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 LRFN2Q9ULH4 789 aa8.99□□□□□ -0.97
SF3A1-210ENST00000498259 NENFQ9UMX5 172 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms