RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 MTRRQ9UBK8 725 aa12.15□□□□□ -0.46
ERCC8-208ENST00000497892 BACE2Q9Y5Z0 518 aa12.15□□□□□ -0.46
ERCC8-208ENST00000497892 BDP1A6H8Y1 2624 aa12.15□□□□□ -0.46
ERCC8-208ENST00000497892 TCF20Q9UGU0 1960 aaKnown RBP12.14□□□□□ -0.47
ERCC8-208ENST00000497892 MUC3AQ02505 3323 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 SPTLC1O15269 473 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 GLUD1P00367 558 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 HOXB8P17481 243 aaPredicted RBP12.14□□□□□ -0.47
ERCC8-208ENST00000497892 LILRA4P59901 499 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 CLUL1Q15846 466 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 SYCE2Q6PIF2 218 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 C1orf127Q8N9H9 656 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 CXorf38Q8TB03 319 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 CACTINQ8WUQ7 758 aaKnown RBP12.14□□□□□ -0.47
ERCC8-208ENST00000497892 FAM84AQ96KN4 292 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 MFSD14AQ96MC6 490 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 GBP4Q96PP9 640 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 CLSTN3Q9BQT9 956 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 MTMR12Q9C0I1 747 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 GZF1Q9H116 711 aaPredicted RBP12.14□□□□□ -0.47
ERCC8-208ENST00000497892 INTS13Q9NVM9 706 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 ITGA11Q9UKX5 1188 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 C5orf42Q9H799 3197 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 DENND4AQ7Z401 1863 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 C2orf16Q68DN1 1984 aa12.14□□□□□ -0.47
ERCC8-208ENST00000497892 ADAM12O43184 909 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 MBTPS2O43462 519 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 TGM5O43548 720 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 CALUO43852 315 aaPredicted RBP12.13□□□□□ -0.47
ERCC8-208ENST00000497892 ITGB3P05106 788 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 TMEM191BP0C7N4 346 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 IL9P15248 144 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 NR2F2P24468 414 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 POLR2BP30876 1174 aaKnown RBP12.13□□□□□ -0.47
ERCC8-208ENST00000497892 PNPLA4P41247 253 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 PRCPP42785 496 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 TAF6P49848 677 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 MRPL58Q14197 206 aaKnown RBP12.13□□□□□ -0.47
ERCC8-208ENST00000497892 EDRF1Q3B7T1 1238 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 SV2CQ496J9 727 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 LMBRD2Q68DH5 695 aaPredicted RBP12.13□□□□□ -0.47
ERCC8-208ENST00000497892 SLC8B1Q6J4K2 584 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 LILRA6Q6PI73 481 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 RSPO2Q6UXX9 243 aaPredicted RBP12.13□□□□□ -0.47
ERCC8-208ENST00000497892 GLYCTKQ8IVS8 523 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 LRRC52Q8N7C0 313 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 RDH13Q8NBN7 331 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 APPL2Q8NEU8 664 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 OR5B17Q8NGF7 314 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 ADAMTS19Q8TE59 1207 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 HDAC7Q8WUI4 952 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 CCDC127Q96BQ5 260 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 ANKRD36BP1Q96IX9 119 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 ZNF560Q96MR9 790 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 CGRRF1Q99675 332 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 S1PR5Q9H228 398 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 SFXN1Q9H9B4 322 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 MAN1C1Q9NR34 630 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 DPP7Q9UHL4 492 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 MAN1B1Q9UKM7 699 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 FAM50BQ9Y247 325 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 USP15Q9Y4E8 981 aaPredicted RBP12.13□□□□□ -0.47
ERCC8-208ENST00000497892 CDY1Q9Y6F8 540 aa12.13□□□□□ -0.47
ERCC8-208ENST00000497892 ARHGEF37A1IGU5 675 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 H7C4K7 107 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 MAPK13O15264 365 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 TBC1D4O60343 1298 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 OAZ2O95190 189 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 TNNC2P02585 160 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 DLATP10515 647 aaKnown RBP12.12□□□□□ -0.47
ERCC8-208ENST00000497892 ODC1P11926 461 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 TYMPP19971 482 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 OR1D2P34982 312 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 CASP4P49662 377 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 CLDN10P78369 228 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 YWHAHQ04917 246 aaPredicted RBP12.12□□□□□ -0.47
ERCC8-208ENST00000497892 ITIH3Q06033 890 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 RAB33AQ14088 237 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 MORC3Q14149 939 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 SMAD2Q15796 467 aaKnown RBP12.12□□□□□ -0.47
ERCC8-208ENST00000497892 DUOXA2Q1HG44 320 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 CENPPQ6IPU0 288 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 ZNF280DQ6N043 979 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 ELMSAN1Q6PJG2 1045 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 DSTYKQ6XUX3 929 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 PALB2Q86YC2 1186 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 ADSSL1Q8N142 457 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 PLEKHO2Q8TD55 490 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 SUSD6Q92537 303 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 ZNF516Q92618 1163 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 SENP8Q96LD8 212 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 FNBP1Q96RU3 617 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 ADAM7Q9H2U9 754 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 PLEKHA4Q9H4M7 779 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 LMBRD1Q9NUN5 540 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 SIX4Q9UIU6 781 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 FBXW11Q9UKB1 542 aa12.12□□□□□ -0.47
ERCC8-208ENST00000497892 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
ERCC8-208ENST00000497892 TULP1O00294 542 aaPredicted RBP12.11□□□□□ -0.47
ERCC8-208ENST00000497892 AKAP3O75969 853 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms