RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 ADAM2Q99965 735 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 TMEM117Q9H0C3 514 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 ELAC1Q9H777 363 aaKnown RBP8.66□□□□□ -1.02
VPS45-210ENST00000497638 ATP6V0A4Q9HBG4 840 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 RGS18Q9NS28 235 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 RTEL1Q9NZ71 1219 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 SPG21Q9NZD8 308 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 PCDHA2Q9Y5H9 948 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 LAMA4Q16363 1823 aa8.66□□□□□ -1.02
VPS45-210ENST00000497638 BAZ2BQ9UIF8 2168 aaKnown RBP8.65□□□□□ -1.02
VPS45-210ENST00000497638 A0A0D9SFI3 127 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 SMIM35A0A1B0GVV1 85 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 GSTTP1A0A1W2PQM5 241 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 C2orf71A6NGG8 1288 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 MGEA5O60502 916 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 RPS6KA5O75582 802 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 WEE2P0C1S8 567 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 TMEM62Q0P6H9 643 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 TMEM266Q2M3C6 531 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 TSNAXIP1Q2TAA8 658 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 DIEXFQ68CQ4 756 aaKnown RBP8.65□□□□□ -1.02
VPS45-210ENST00000497638 TMPRSS7Q7RTY8 843 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 HOMER1Q86YM7 354 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 PIWIL2Q8TC59 973 aaKnown RBP8.65□□□□□ -1.02
VPS45-210ENST00000497638 RIN2Q8WYP3 895 aaPredicted RBP8.65□□□□□ -1.02
VPS45-210ENST00000497638 GPRASP2Q96D09 838 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 IGSF9Q9P2J2 1179 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 WNT16Q9UBV4 365 aa8.65□□□□□ -1.02
VPS45-210ENST00000497638 FASNP49327 2511 aaKnown RBP8.64□□□□□ -1.03
VPS45-210ENST00000497638 PRR5-ARHGAP8B1AHC4 643 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 ZNF213O14771 459 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 KINO60870 393 aaKnown RBP8.64□□□□□ -1.03
VPS45-210ENST00000497638 SP9P0CG40 484 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 ARP10275 920 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 FGFR1P11362 822 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 KCNA2P16389 499 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 CFPP27918 469 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 HK2P52789 917 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 MFAP1P55081 439 aaKnown RBP8.64□□□□□ -1.03
VPS45-210ENST00000497638 FAM189BP81408 668 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 ARHGAP8P85298 464 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 LMNB2Q03252 620 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 NONOQ15233 471 aaKnown RBP eCLIP8.64□□□□□ -1.03
VPS45-210ENST00000497638 RALGPS1Q5JS13 557 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 IFIT1BQ5T764 474 aaKnown RBP8.64□□□□□ -1.03
VPS45-210ENST00000497638 ZNF589Q86UQ0 364 aaPredicted RBP8.64□□□□□ -1.03
VPS45-210ENST00000497638 CREG2Q8IUH2 290 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 DCLK2Q8N568 766 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 C12orf76Q8N812 135 aaPredicted RBP8.64□□□□□ -1.03
VPS45-210ENST00000497638 SUMF1Q8NBK3 374 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 TMEM87AQ8NBN3 555 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 OTUD7AQ8TE49 926 aaPredicted RBP8.64□□□□□ -1.03
VPS45-210ENST00000497638 ZBTB10Q96DT7 871 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 FAM227BQ96M60 508 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 UBAC1Q9BSL1 405 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 AZI2Q9H6S1 392 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 SFXN1Q9H9B4 322 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 KCNK12Q9HB15 430 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 RNF19AQ9NV58 838 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 NCDNQ9UBB6 729 aa8.64□□□□□ -1.03
VPS45-210ENST00000497638 NOC2LQ9Y3T9 749 aaKnown RBP8.64□□□□□ -1.03
VPS45-210ENST00000497638 CNOT1A5YKK6 2376 aaKnown RBP8.63□□□□□ -1.03
VPS45-210ENST00000497638 B4E1Z4 1266 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 ATXN1P54253 815 aaKnown RBP8.63□□□□□ -1.03
VPS45-210ENST00000497638 RPL6Q02878 288 aaKnown RBP8.63□□□□□ -1.03
VPS45-210ENST00000497638 GIT2Q14161 759 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 GPR149Q86SP6 731 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 CABP7Q86V35 215 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 MCATQ8IVS2 390 aaKnown RBP8.63□□□□□ -1.03
VPS45-210ENST00000497638 C1orf210Q8IVY1 113 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 SLC39A11Q8N1S5 342 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 CUL5Q93034 780 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 CASD1Q96PB1 797 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 PIGSQ96S52 555 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 RTKNQ9BST9 563 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 RIOX1Q9H6W3 641 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 TBC1D17Q9HA65 648 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 MAD2L2Q9UI95 211 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 TMEM59LQ9UK28 342 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 ST3GAL5Q9UNP4 418 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 GINS2Q9Y248 185 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 IRAK3Q9Y616 596 aa8.63□□□□□ -1.03
VPS45-210ENST00000497638 ANKRD11Q6UB99 2663 aaPredicted RBP8.62□□□□□ -1.03
VPS45-210ENST00000497638 SALL3Q9BXA9 1300 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.62□□□□□ -1.03
VPS45-210ENST00000497638 WASH4PA8MWX3 477 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 NARSO43776 548 aaKnown RBP8.62□□□□□ -1.03
VPS45-210ENST00000497638 ATP9AO75110 1047 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 CXCL14O95715 111 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 ESR1P03372 595 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 ADRB1P08588 477 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 TMEM253P0C7T8 217 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 C1QTNF9P0C862 333 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 EPCAMP16422 314 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 TFE3P19532 575 aaPredicted RBP8.62□□□□□ -1.03
VPS45-210ENST00000497638 TPP2P29144 1249 aaPredicted RBP8.62□□□□□ -1.03
VPS45-210ENST00000497638 CA8P35219 290 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 PBX3P40426 434 aa8.62□□□□□ -1.03
VPS45-210ENST00000497638 POLGP54098 1239 aaPredicted RBP8.62□□□□□ -1.03
VPS45-210ENST00000497638 NMIQ13287 307 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms