RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 CCDC78A2IDD5 438 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 BTN3A1O00481 513 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 DNAJB5O75953 348 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 ABHD16AO95870 558 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 MYL3P08590 195 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 ZNF783Q6ZMS7 281 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 PALM2Q8IXS6 379 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 CFAP52Q8N1V2 620 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 CPT1CQ8TCG5 803 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 PARD3BQ8TEW8 1205 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 EXTL1Q92935 676 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 TBCBQ99426 244 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 C1QTNF3Q9BXJ4 246 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 TEX101Q9BY14 249 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 TINAGL1Q9GZM7 467 aaPredicted RBP5.93□□□□□ -1.46
VPS36-206ENST00000497149 RNPEPQ9H4A4 650 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 STK32BQ9NY57 414 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 HSFX1Q9UBD0 423 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 SRRDQ9UH36 339 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 PHTF1Q9UMS5 762 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 AATKQ6ZMQ8 1374 aa5.93□□□□□ -1.46
VPS36-206ENST00000497149 RHPN2P1A8MT19 583 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 TBC1D4O60343 1298 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 RPS6KA4O75676 772 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 UNC5CO95185 931 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 ZNF20P17024 532 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 RHBDL3P58872 404 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 MXRA7P84157 204 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 EFEMP1Q12805 493 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 TCF15Q12870 199 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 CDSNQ15517 529 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 SESTD1Q86VW0 696 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 C1orf210Q8IVY1 113 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 IL17DQ8TAD2 202 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 STRBPQ96SI9 672 aaKnown RBP5.92□□□□□ -1.46
VPS36-206ENST00000497149 ZSWIM1Q9BR11 485 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 CNPPD1Q9BV87 410 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 ZNF703Q9H7S9 590 aaPredicted RBP5.92□□□□□ -1.46
VPS36-206ENST00000497149 SMURF2Q9HAU4 748 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 SACM1LQ9NTJ5 587 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 VSX1Q9NZR4 365 aaPredicted RBP5.92□□□□□ -1.46
VPS36-206ENST00000497149 CDYLQ9Y232 598 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 PLEKHM1Q9Y4G2 1056 aa5.92□□□□□ -1.46
VPS36-206ENST00000497149 M0QYG6 137 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 KIF20AO95235 890 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 IFIT2P09913 472 aaKnown RBP5.91□□□□□ -1.46
VPS36-206ENST00000497149 SPATA31D3P0C874 917 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 PIM1P11309 404 aaPredicted RBP5.91□□□□□ -1.46
VPS36-206ENST00000497149 ZKSCAN1P17029 563 aaPredicted RBP5.91□□□□□ -1.46
VPS36-206ENST00000497149 FGFR4P22455 802 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 FDXRP22570 491 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 BUD31P41223 144 aaPredicted RBP5.91□□□□□ -1.46
VPS36-206ENST00000497149 AK2P54819 239 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 POU6F2P78424 691 aaPredicted RBP5.91□□□□□ -1.46
VPS36-206ENST00000497149 HSD11B2P80365 405 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 OCA2Q04671 838 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 PIGFQ07326 219 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 ZNF844Q08AG5 666 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 SLC13A2Q13183 592 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 IFIT5Q13325 482 aaKnown RBP5.91□□□□□ -1.46
VPS36-206ENST00000497149 CTBP1Q13363 440 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 AMOTQ4VCS5 1084 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 USP39Q53GS9 565 aaKnown RBP5.91□□□□□ -1.46
VPS36-206ENST00000497149 FAM160B1Q5W0V3 765 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 LRRC55Q6ZSA7 311 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 SPATA31D4Q6ZUB0 917 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 PPP1R32Q7Z5V6 425 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 MAPKAPK5Q8IW41 473 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 MAML1Q92585 1016 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 NMD3Q96D46 503 aaKnown RBP5.91□□□□□ -1.46
VPS36-206ENST00000497149 MED15Q96RN5 788 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 SLC46A2Q9BY10 475 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 MRPS18AQ9NVS2 196 aaKnown RBP5.91□□□□□ -1.46
VPS36-206ENST00000497149 CEP72Q9P209 647 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 AFF4Q9UHB7 1163 aaKnown RBP5.91□□□□□ -1.46
VPS36-206ENST00000497149 TSC22D4Q9Y3Q8 395 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 SNX13Q9Y5W8 968 aa5.91□□□□□ -1.46
VPS36-206ENST00000497149 FOXN3O00409 490 aaPredicted RBP5.9□□□□□ -1.46
VPS36-206ENST00000497149 POLRMTO00411 1230 aaKnown RBP5.9□□□□□ -1.46
VPS36-206ENST00000497149 FAM20BO75063 409 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 PEX14O75381 377 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 GPANK1O95872 356 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 GRPP07492 148 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 ELANEP08246 267 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 TM4SF4P48230 202 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 SLC11A2P49281 568 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 PRIM2P49643 509 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 ALDH5A1P51649 535 aaPredicted RBP5.9□□□□□ -1.46
VPS36-206ENST00000497149 UCP3P55916 312 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 ADAM17P78536 824 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 FAM189BP81408 668 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 LONRF1Q17RB8 773 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 C3orf38Q5JPI3 329 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 SPDYAQ5MJ70 313 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 LMBRD2Q68DH5 695 aaPredicted RBP5.9□□□□□ -1.46
VPS36-206ENST00000497149 FOXR2Q6PJQ5 311 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.9□□□□□ -1.46
VPS36-206ENST00000497149 TMEM132CQ8N3T6 1108 aa5.9□□□□□ -1.46
VPS36-206ENST00000497149 SAMD3Q8N6K7 520 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms