RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MTMR11A4FU01 709 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 ECI2O75521 394 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 EPHA5P54756 1037 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 GPR17Q13304 367 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 MYBPC2Q14324 1141 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 FOXD4L5Q5VV16 416 aaPredicted RBP15.45■□□□□ 0.06
VTI1A-209ENST00000496445 SHC4Q6S5L8 630 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 PDZD4Q76G19 769 aaPredicted RBP15.45■□□□□ 0.06
VTI1A-209ENST00000496445 BRSK2Q8IWQ3 736 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 TTC9BQ8N6N2 239 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 DTWD2Q8NBA8 298 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 FOXD4L4Q8WXT5 416 aaPredicted RBP15.45■□□□□ 0.06
VTI1A-209ENST00000496445 ZNF396Q96N95 335 aaPredicted RBP15.45■□□□□ 0.06
VTI1A-209ENST00000496445 CBWD1Q9BRT8 395 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 FOXQ1Q9C009 403 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 TNMDQ9H2S6 317 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 PANK4Q9NVE7 773 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 DPP3Q9NY33 737 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 DLGAP2Q9P1A6 1054 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 TFIP11Q9UBB9 837 aaKnown RBP15.45■□□□□ 0.06
VTI1A-209ENST00000496445 EXOC7Q9UPT5 735 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 OBSL1O75147 1896 aa15.45■□□□□ 0.06
VTI1A-209ENST00000496445 NCANO14594 1321 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 MICAL2O94851 1124 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 PRPF6O94906 941 aaKnown RBP15.44■□□□□ 0.06
VTI1A-209ENST00000496445 IL18RAPO95256 599 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 YEATS4O95619 227 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 CYP11A1P05108 521 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 GJA1P17302 382 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 RFX1P22670 979 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 NBL1P41271 181 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 TAF6P49848 677 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 STARD6P59095 220 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 DUSP4Q13115 394 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 SNW1Q13573 536 aaKnown RBP15.44■□□□□ 0.06
VTI1A-209ENST00000496445 PKP1Q13835 747 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 POSTNQ15063 836 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 TANGO2Q6ICL3 276 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 CENPPQ6IPU0 288 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 TMC8Q8IU68 726 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 HSCBQ8IWL3 235 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 ELMOD1Q8N336 334 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 HPS3Q969F9 1004 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 BORCS6Q96GS4 357 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 FAM84AQ96KN4 292 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 ZNF512Q96ME7 567 aaPredicted RBP15.44■□□□□ 0.06
VTI1A-209ENST00000496445 ZSWIM3Q96MP5 696 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 FAM213AQ9BRX8 229 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 DDX23Q9BUQ8 820 aaKnown RBP15.44■□□□□ 0.06
VTI1A-209ENST00000496445 LRRC3Q9BY71 257 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 TRIM9Q9C026 710 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 KBTBD4Q9NVX7 518 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 PCDHB13Q9Y5F0 798 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 DENND4CQ5VZ89 1909 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 FANCMQ8IYD8 2048 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 DNAH14Q0VDD8 3507 aa15.44■□□□□ 0.06
VTI1A-209ENST00000496445 PROB1E7EW31 1015 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 STK25O00506 426 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 ZNF197O14709 1029 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 CUTAO60888 179 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 LRRN2O75325 713 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 SOAT2O75908 522 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 F13A1P00488 732 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 DCNP07585 359 aaKnown RBP15.43■□□□□ 0.06
VTI1A-209ENST00000496445 ZSCAN22P10073 491 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-209ENST00000496445 GLULP15104 373 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 GARTP22102 1010 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 PAX3P23760 479 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 ALCAMQ13740 583 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 ANGPT1Q15389 498 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 MLF2Q15773 248 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-209ENST00000496445 FOXD4L6Q3SYB3 417 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-209ENST00000496445 FAM78AQ5JUQ0 283 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 SCARA3Q6AZY7 606 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 IQCEQ6IPM2 695 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 FOXD4L3Q6VB84 417 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-209ENST00000496445 NT5DC4Q86YG4 428 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 ATAD1Q8NBU5 361 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 PJA1Q8NG27 643 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 CXorf38Q8TB03 319 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 SHKBP1Q8TBC3 707 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 ELSPBP1Q96BH3 223 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 ASB16Q96NS5 453 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 ASAH2Q9NR71 780 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 RBAKQ9NYW8 714 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-209ENST00000496445 SLC27A5Q9Y2P5 690 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 KIF26AQ9ULI4 1882 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-209ENST00000496445 ZNF292O60281 2723 aa15.43■□□□□ 0.06
VTI1A-209ENST00000496445 GOLGA8IPA6NC78 632 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 GOLGA8JA6NMD2 632 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 CYB561D2O14569 222 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 MYL4P12829 197 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 HOXD13P35453 343 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 PLD1Q13393 1074 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 TEAD2Q15562 447 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 SLC44A4Q53GD3 710 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 CYP4A22Q5TCH4 519 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 CCDC65Q8IXS2 484 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 SYCP3Q8IZU3 236 aa15.42■□□□□ 0.06
VTI1A-209ENST00000496445 C1orf127Q8N9H9 656 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms