RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 LTA4HP09960 611 aaKnown RBP4.74□□□□□ -1.65
CLK1-214ENST00000496205 XPAP23025 273 aaPredicted RBP4.74□□□□□ -1.65
CLK1-214ENST00000496205 HTR1BP28222 390 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 NRG3P56975 720 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 COBLL1Q53SF7 1204 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 MFSD14BQ5SR56 506 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 AGAP9Q5VTM2 703 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 B3GNTL1Q67FW5 361 aaPredicted RBP4.74□□□□□ -1.65
CLK1-214ENST00000496205 PPP4R4Q6NUP7 873 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 NPNTQ6UXI9 565 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 Q6ZNX1 250 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 CCAR1Q8IX12 1150 aaKnown RBP4.74□□□□□ -1.65
CLK1-214ENST00000496205 CAMKK1Q8N5S9 505 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
CLK1-214ENST00000496205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.74□□□□□ -1.65
CLK1-214ENST00000496205 SNX33Q8WV41 574 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 RPS6KC1Q96S38 1066 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 CDC5LQ99459 802 aaKnown RBP4.74□□□□□ -1.65
CLK1-214ENST00000496205 C1QTNF7Q9BXJ2 289 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 BHMT2Q9H2M3 363 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 KLK15Q9H2R5 256 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 LDAHQ9H6V9 325 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 PCDHGB6Q9Y5F9 930 aa4.74□□□□□ -1.65
CLK1-214ENST00000496205 ITGA10O75578 1167 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 ZBED1O96006 694 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 CTGFP29279 349 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 SERPINB3P29508 390 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 SREBF1P36956 1147 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 ZNF81P51508 661 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 AGFG1P52594 562 aaKnown RBP4.73□□□□□ -1.65
CLK1-214ENST00000496205 CACNA2D1P54289 1103 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 KRTAP10-7P60409 375 aaPredicted RBP4.73□□□□□ -1.65
CLK1-214ENST00000496205 RHOT1Q8IXI2 618 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 FAM43AQ8N2R8 423 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 TMEM132CQ8N3T6 1108 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 CELF5Q8N6W0 485 aaKnown RBP4.73□□□□□ -1.65
CLK1-214ENST00000496205 ZNF366Q8N895 744 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 REPS2Q8NFH8 660 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 OR56A1Q8NGH5 318 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 SLC35B2Q8TB61 432 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 HDAC10Q969S8 669 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 RGMAQ96B86 450 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 PDLIM2Q96JY6 352 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 PHACTR3Q96KR7 559 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 MRGPRX4Q96LA9 322 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 MPHOSPH6Q99547 160 aaKnown RBP4.73□□□□□ -1.65
CLK1-214ENST00000496205 TMEM60Q9H2L4 133 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 ATP6V0A4Q9HBG4 840 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 KLHL11Q9NVR0 708 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 NR2E3Q9Y5X4 410 aa4.73□□□□□ -1.65
CLK1-214ENST00000496205 RPTORQ8N122 1335 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 PLIN1O60240 522 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 HRGP04196 525 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 MYL3P08590 195 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 FPR1P21462 350 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 PCSK1P29120 753 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 ATP8B2P98198 1209 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 SRSF4Q08170 494 aaKnown RBP4.72□□□□□ -1.65
CLK1-214ENST00000496205 ARMC6Q6NXE6 501 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 MIGA2Q7L4E1 593 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 MAPKAPK5Q8IW41 473 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 IFI44Q8TCB0 444 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 PARD3BQ8TEW8 1205 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 C7orf25Q9BPX7 421 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 APOL5Q9BWW9 433 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 NAA15Q9BXJ9 866 aaKnown RBP4.72□□□□□ -1.65
CLK1-214ENST00000496205 ALOXE3Q9BYJ1 711 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 KRTAP1-5Q9BYS1 174 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 MAN1C1Q9NR34 630 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 USP25Q9UHP3 1055 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 L1RE1Q9UN81 338 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 ATP11BQ9Y2G3 1177 aa4.72□□□□□ -1.65
CLK1-214ENST00000496205 CFAP20Q9Y6A4 193 aaKnown RBP4.72□□□□□ -1.65
CLK1-214ENST00000496205 CCDC78A2IDD5 438 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 FAM171A2A8MVW0 826 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 FAM227AF5H4B4 570 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 TPD52L2O43399 206 aaKnown RBP4.71□□□□□ -1.66
CLK1-214ENST00000496205 DTNBO60941 627 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 FTLP02792 175 aaPredicted RBP4.71□□□□□ -1.66
CLK1-214ENST00000496205 PROK1P58294 105 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 MEF2AQ02078 507 aaPredicted RBP4.71□□□□□ -1.66
CLK1-214ENST00000496205 NOGQ13253 232 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 SEMA5AQ13591 1074 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 SAFBQ15424 915 aaKnown RBP eCLIP4.71□□□□□ -1.66
CLK1-214ENST00000496205 C19orf54Q5BKX5 351 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 PRAMEF14Q5SWL7 426 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 TSHZ3Q63HK5 1081 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 KRTAP5-11Q6L8G4 156 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 CCDC149Q6ZUS6 474 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 RHOT2Q8IXI1 618 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 TRMT2AQ8IZ69 625 aaKnown RBP4.71□□□□□ -1.66
CLK1-214ENST00000496205 DCBLD1Q8N8Z6 715 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 ZFP28Q8NHY6 868 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 KLHDC4Q8TBB5 520 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 CCHCR1Q8TD31 782 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 ZNF480Q8WV37 535 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 FUBP1Q96AE4 644 aaKnown RBP4.71□□□□□ -1.66
CLK1-214ENST00000496205 CLPTM1LQ96KA5 538 aa4.71□□□□□ -1.66
CLK1-214ENST00000496205 VRK1Q99986 396 aaPredicted RBP4.71□□□□□ -1.66
CLK1-214ENST00000496205 ZSWIM1Q9BR11 485 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms