RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 UBA6A0AVT1 1052 aaPredicted RBP7.7□□□□□ -1.18
VIM-207ENST00000495528 C19orf81C9J6K1 198 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 APOL3O95236 402 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 BAG3O95817 575 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 CYP1A1P04798 512 aaPredicted RBP7.7□□□□□ -1.18
VIM-207ENST00000495528 ASNSP08243 561 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 COL6A1P12109 1028 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 TRIM27P14373 513 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 BMP7P18075 431 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 CCND3P30281 292 aaPredicted RBP7.7□□□□□ -1.18
VIM-207ENST00000495528 TMPRSS15P98073 1019 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 WDR72Q3MJ13 1102 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 PRAMEF9Q5VWM5 478 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 NAA16Q6N069 864 aaPredicted RBP7.7□□□□□ -1.18
VIM-207ENST00000495528 LHFPL2Q6ZUX7 228 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 GPR142Q7Z601 462 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 ADGRA1Q86SQ6 560 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 MAPKAPK5Q8IW41 473 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 ADAMTS17Q8TE56 1095 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 SOCS4Q8WXH5 440 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 PORCNQ9H237 461 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 ZMAT4Q9H898 229 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 MTMR10Q9NXD2 777 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 FTSJ1Q9UET6 329 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 DOCK2Q92608 1830 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 DOCK1Q14185 1865 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 PTPRFP10586 1907 aa7.7□□□□□ -1.18
VIM-207ENST00000495528 TRIM13O60858 407 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 KNG1P01042 644 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 UQCRFS1P1P0C7P4 283 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 CPEP16870 476 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 ZKSCAN1P17029 563 aaPredicted RBP7.69□□□□□ -1.18
VIM-207ENST00000495528 POU3F3P20264 500 aaPredicted RBP7.69□□□□□ -1.18
VIM-207ENST00000495528 MAPK4P31152 587 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 SMAD3P84022 425 aaKnown RBP7.69□□□□□ -1.18
VIM-207ENST00000495528 ALDH6A1Q02252 535 aaKnown RBP7.69□□□□□ -1.18
VIM-207ENST00000495528 G3BP1Q13283 466 aaKnown RBP eCLIP7.69□□□□□ -1.18
VIM-207ENST00000495528 STAT4Q14765 748 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 EPHA7Q15375 998 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 LRRC26Q2I0M4 334 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 TTC38Q5R3I4 469 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 BROXQ5VW32 411 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 PLEKHH3Q7Z736 793 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 CCAR1Q8IX12 1150 aaKnown RBP7.69□□□□□ -1.18
VIM-207ENST00000495528 TXNDC5Q8NBS9 432 aaKnown RBP7.69□□□□□ -1.18
VIM-207ENST00000495528 SYT8Q8NBV8 401 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 NUDT10Q8NFP7 164 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 CALML6Q8TD86 181 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 NUDT11Q96G61 164 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 NOL10Q9BSC4 688 aaKnown RBP7.69□□□□□ -1.18
VIM-207ENST00000495528 PAGR1Q9BTK6 254 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 TMX1Q9H3N1 280 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 ZBTB21Q9ULJ3 1066 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 STXBP5LQ9Y2K9 1186 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 FLT1P17948 1338 aa7.69□□□□□ -1.18
VIM-207ENST00000495528 ALPK3Q96L96 1907 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 H0Y858 1186 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 ZEB2O60315 1214 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 CNMDO75829 334 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 EYA4O95677 639 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 PRLP01236 227 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 GNAI2P04899 355 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 CD40P25942 277 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 RGS2P41220 211 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 KCNC1P48547 511 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 DYNLL1P63167 89 aaKnown RBP7.68□□□□□ -1.18
VIM-207ENST00000495528 CD83Q01151 205 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 TTC39AQ5SRH9 613 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 ZNF761Q86XN6 746 aaPredicted RBP7.68□□□□□ -1.18
VIM-207ENST00000495528 FTSJ3Q8IY81 847 aaKnown RBP7.68□□□□□ -1.18
VIM-207ENST00000495528 ZZZ3Q8IYH5 903 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 TMEM57Q8N5G2 664 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 C7orf31Q8N865 590 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 EXOC6Q8TAG9 804 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 SLC5A5Q92911 643 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 E2F7Q96AV8 911 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 EDC3Q96F86 508 aaKnown RBP7.68□□□□□ -1.18
VIM-207ENST00000495528 BTBD2Q9BX70 525 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 TMEM168Q9H0V1 697 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 OR10A5Q9H207 317 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 POFUT1Q9H488 388 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 FLRT1Q9NZU1 646 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 SAP30BPQ9UHR5 308 aaKnown RBP7.68□□□□□ -1.18
VIM-207ENST00000495528 MSRAQ9UJ68 235 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 COL6A3P12111 3177 aa7.68□□□□□ -1.18
VIM-207ENST00000495528 BRINP1O60477 761 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 RAB11FIP3O75154 756 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 GH2P01242 217 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 HLA-DOAP06340 250 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 LSP1P33241 339 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 AMPD3Q01432 767 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 ROM1Q03395 351 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 ADCY1Q08828 1119 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 TERF2Q15554 542 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 CCDC158Q5M9N0 1113 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 NT5DC1Q5TFE4 455 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 SLFN12LQ6IEE8 588 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 OTOP2Q7RTS6 562 aa7.67□□□□□ -1.18
VIM-207ENST00000495528 DDX42Q86XP3 938 aaKnown RBP eCLIP7.67□□□□□ -1.18
VIM-207ENST00000495528 MAML3Q96JK9 1138 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms