RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 RALGDSQ12967 914 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 CDC16Q13042 620 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 KRT24Q2M2I5 525 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 LRIT3Q3SXY7 679 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 MDH1BQ5I0G3 518 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 KCNT1Q5JUK3 1230 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 SPDYAQ5MJ70 313 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 CLVS2Q5SYC1 327 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 SHEQ5VZ18 495 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 CEP85Q6P2H3 762 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 RNF135Q8IUD6 432 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 CLVS1Q8IUQ0 354 aaPredicted RBP9.87□□□□□ -0.83
RPSA-209ENST00000495394 UBR7Q8N806 425 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 ZNF454Q8N9F8 522 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 EHBP1Q8NDI1 1231 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 TTLQ8NG68 377 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 CPLX3Q8WVH0 158 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 STARD8Q92502 1023 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 HDAC2Q92769 488 aaKnown RBP9.87□□□□□ -0.83
RPSA-209ENST00000495394 TMIGD2Q96BF3 282 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 METTL2AQ96IZ6 378 aaKnown RBP9.87□□□□□ -0.83
RPSA-209ENST00000495394 NSMCE3Q96MG7 304 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 DNAJC7Q99615 494 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 TM9SF3Q9HD45 589 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 HACD3Q9P035 362 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 NDUFA13Q9P0J0 144 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 SOX13Q9UN79 622 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 HPS5Q9UPZ3 1129 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 LEMD3Q9Y2U8 911 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 HEY1Q9Y5J3 304 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 SNX9Q9Y5X1 595 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 ATP10DQ9P241 1426 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 TUBGCP6Q96RT7 1819 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 UBR3Q6ZT12 1888 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 PNMA6FA0A0J9YX94 578 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 MAGEB3O15480 346 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 ST18O60284 1047 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 MAFO75444 373 aaPredicted RBP9.87□□□□□ -0.83
RPSA-209ENST00000495394 URODP06132 367 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 PABPC4LP0CB38 370 aaKnown RBP9.87□□□□□ -0.83
RPSA-209ENST00000495394 COL6A2P12110 1019 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 M6PRP20645 277 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 HMOX2P30519 316 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 GBP1P32455 592 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 PCP4P48539 62 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 POU3F4P49335 361 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 EPHA7Q15375 998 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 TAF12Q16514 161 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 KANK2Q63ZY3 851 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 CNNM4Q6P4Q7 775 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 GTF3C2Q8WUA4 911 aaPredicted RBP9.87□□□□□ -0.83
RPSA-209ENST00000495394 CCDC127Q96BQ5 260 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 TUBGCP3Q96CW5 907 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 SELENOSQ9BQE4 189 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 SGIP1Q9BQI5 828 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 TFB2MQ9H5Q4 396 aaKnown RBP9.87□□□□□ -0.83
RPSA-209ENST00000495394 NEUROD4Q9HD90 331 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 VCX3AQ9NNX9 186 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 MRPL40Q9NQ50 206 aaKnown RBP9.87□□□□□ -0.83
RPSA-209ENST00000495394 TAS2R7Q9NYW3 318 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 TRPS1Q9UHF7 1281 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 CHMP2BQ9UQN3 213 aa9.87□□□□□ -0.83
RPSA-209ENST00000495394 MYH14Q7Z406 1995 aaKnown RBP9.87□□□□□ -0.83
RPSA-209ENST00000495394 SH3D21A4FU49 640 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 PRR5-ARHGAP8B1AHC4 643 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 ANKRD65E5RJM6 399 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 THAP12O43422 761 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 KCNQ3O43525 872 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 LRRN2O75325 713 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 TOMM70O94826 608 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 OXSR1O95747 527 aaPredicted RBP9.86□□□□□ -0.83
RPSA-209ENST00000495394 NR3C2P08235 984 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 SELLP14151 372 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 ATF6P18850 670 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 RXRAP19793 462 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 KELP23276 732 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 LONP1P36776 959 aaKnown RBP9.86□□□□□ -0.83
RPSA-209ENST00000495394 ACADVLP49748 655 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 NFKB2Q00653 900 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 ENPEPQ07075 957 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 AP3B2Q13367 1082 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 STX12Q86Y82 276 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 RGL4Q8IZJ4 473 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 ZNF654Q8IZM8 581 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 CCNYL1Q8N7R7 359 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 ANKRD44Q8N8A2 993 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 FBXO15Q8NCQ5 510 aaPredicted RBP9.86□□□□□ -0.83
RPSA-209ENST00000495394 RUBCNQ92622 972 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 KIFC2Q96AC6 838 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 SLC4A9Q96Q91 983 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 SLC26A6Q9BXS9 759 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 GCOM2Q9BZD3 368 aaPredicted RBP9.86□□□□□ -0.83
RPSA-209ENST00000495394 CENPHQ9H3R5 247 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 MVB12BQ9H7P6 319 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 FANCEQ9HB96 536 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 PIH1D3Q9NQM4 214 aaKnown RBP9.86□□□□□ -0.83
RPSA-209ENST00000495394 PRDM5Q9NQX1 630 aaPredicted RBP9.86□□□□□ -0.83
RPSA-209ENST00000495394 LRRC4BQ9NT99 713 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 ASNSD1Q9NWL6 643 aa9.86□□□□□ -0.83
RPSA-209ENST00000495394 ERVK-19Q9WJR5 959 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms