RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 KIF11P52732 1056 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 FPGSQ05932 587 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 TMEM270Q6UE05 265 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 SCARA5Q6ZMJ2 495 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 DPH6Q7L8W6 267 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 VPS36Q86VN1 386 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 GPIHBP1Q8IV16 184 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 COLGALT2Q8IYK4 626 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 C7orf61Q8IZ16 206 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 TOP6BLQ8N6T0 577 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 RBBP8NLQ8NC74 664 aaPredicted RBP12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 EPS8L1Q8TE68 723 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 MMS19Q96T76 1030 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 EIF3CQ99613 913 aaKnown RBP12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 DEF6Q9H4E7 631 aa12.31□□□□□ -0.44
SLC13A3-211ENST00000495082 ALPK3Q96L96 1907 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 LTBP2Q14767 1821 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 AKR1B10O60218 316 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 CILPO75339 1184 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 TACC1O75410 805 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 PDE6CP51160 858 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 BMS1Q14692 1282 aaKnown RBP12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 SLC18A3Q16572 532 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 SOWAHAQ2M3V2 549 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 DCLRE1AQ6PJP8 1040 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 TOGARAM2Q6ZUX3 1019 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 SLC47A2Q86VL8 602 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 ZNF280BQ86YH2 543 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 OLIG1Q8TAK6 271 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 TOP1MTQ969P6 601 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 BARX2Q9UMQ3 279 aaPredicted RBP12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 MICAL3Q7RTP6 2002 aa12.3□□□□□ -0.44
SLC13A3-211ENST00000495082 DGKIO75912 1065 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 DDHD2O94830 711 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 PAEPP09466 180 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 CD58P19256 250 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 RAP1GAPP47736 663 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 CDH8P55286 799 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 WDR5P61964 334 aaKnown RBP12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 RNASELQ05823 741 aaKnown RBP12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 DNTTIP2Q5QJE6 756 aaKnown RBP12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 C16orf59Q7L2K0 433 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 NOP9Q86U38 636 aaKnown RBP12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 ZNF677Q86XU0 584 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 C3orf58Q8NDZ4 430 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 SLC30A5Q8TAD4 765 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 DDX1Q92499 740 aaKnown RBP12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 BADQ92934 168 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 AGPAT1Q99943 283 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 PAAF1Q9BRP4 392 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 ADGRG1Q9Y653 693 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 SCN1AP35498 2009 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 TBKBP1A7MCY6 615 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 B4GALT3O60512 393 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 HUS1O60921 280 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 B3GAT3O94766 335 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 IPO7O95373 1038 aaKnown RBP12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 CCDC175P0C221 793 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 ACRP10323 421 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 KRT83P78385 493 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 CDR2Q01850 454 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 CD300LGQ6UXG3 332 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 UNC93AQ86WB7 457 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 LRRC43Q8N309 656 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 APPL2Q8NEU8 664 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 SPATA18Q8TC71 538 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 WHAMMQ8TF30 809 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 FAM193BQ96PV7 902 aaPredicted RBP12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 CACNG4Q9UBN1 327 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 ADAMTS1Q9UHI8 967 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 NENFQ9UMX5 172 aa12.29□□□□□ -0.44
SLC13A3-211ENST00000495082 A0A087X0T9 212 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 DDX3XO00571 662 aaKnown RBP eCLIP12.28□□□□□ -0.445e-10■□□□□ 8.6
SLC13A3-211ENST00000495082 CCP110O43303 1012 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 ZSCAN12O43309 604 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 FGBP02675 491 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 FAM228BP0C875 321 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 WARSP23381 471 aaKnown RBP12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 GATMP50440 423 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 RAD23BP54727 409 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 SPA17Q15506 151 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 PSRC1Q6PGN9 363 aaPredicted RBP12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 CCAR2Q8N163 923 aaKnown RBP12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 SLC20A1Q8WUM9 679 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 KBTBD7Q8WVZ9 684 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 ZNF689Q96CS4 500 aaPredicted RBP12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 SENP8Q96LD8 212 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 MRPL45Q9BRJ2 306 aaKnown RBP12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 TMEM175Q9BSA9 504 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 DESI2Q9BSY9 194 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.28□□□□□ -0.443e-7■□□□□ 8.7
SLC13A3-211ENST00000495082 NRDE2Q9H7Z3 1164 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 RC3H2Q9HBD1 1191 aaKnown RBP12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 ACP6Q9NPH0 428 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 L1RE1Q9UN81 338 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 PPP2R2CQ9Y2T4 447 aa12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 REXO2Q9Y3B8 237 aaKnown RBP12.28□□□□□ -0.44
SLC13A3-211ENST00000495082 ARHGEF37A1IGU5 675 aa12.27□□□□□ -0.44
SLC13A3-211ENST00000495082 USP27XA6NNY8 438 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms