RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 TELO2Q9Y4R8 837 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 HEY1Q9Y5J3 304 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SPO11Q9Y5K1 396 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 SNX9Q9Y5X1 595 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 NFASCO94856 1347 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 PRR36Q9H6K5 1346 aa2.89□□□□□ -1.95
MDC1-208ENST00000494654 ZFC3H1O60293 1989 aaKnown RBP2.89□□□□□ -1.95
MDC1-208ENST00000494654 KCPQ6ZWJ8 1503 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ROBO2Q9HCK4 1378 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 BRCA1P38398 1863 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 CDC14CA4D256 554 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 SPATA31C2B4DYI2 1134 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 FAM47E-STBD1D6RA91 191 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 KRIT1O00522 736 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 RASGRF2O14827 1237 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CASQ2O14958 399 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 VILLO15195 856 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PRPF4O43172 522 aaKnown RBP eCLIP2.88□□□□□ -1.95
MDC1-208ENST00000494654 PDE8AO60658 829 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 MAGEC1O60732 1142 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 EDF1O60869 148 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 DNAJC6O75061 913 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ZBED4O75132 1171 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CNOT3O75175 753 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 SPAG7O75391 227 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 MTRF1O75570 445 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 TCEA3O75764 348 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CIB2O75838 187 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 DGKIO75912 1065 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 FGFR1OPO95684 399 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 GGPS1O95749 300 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 LDHAP00338 332 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 IL1BP01584 269 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ATP5BP06576 529 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 ABHD2P08910 425 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 T-ENOLP0DO92 83 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 HSPA8P11142 646 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 CYP2C9P11712 490 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 COL6A2P12110 1019 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ALAS1P13196 640 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 UQCRBP14927 111 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ANPEPP15144 967 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ZNF12P17014 697 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TAC1P20366 129 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ENDOUP21128 410 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 FUT4P22083 530 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 LORP23490 312 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 CASP1P29466 404 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 LONP1P36776 959 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 PPARGP37231 505 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 RPL5P46777 297 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 VPS41P49754 854 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 KLK7P49862 253 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 BCAP31P51572 246 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 HNRNPFP52597 415 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 CHN2P52757 468 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ARFIP2P53365 341 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PMS1P54277 932 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 NPEPPSP55786 919 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 IL9RQ01113 521 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 FOXK2Q01167 660 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 DR1Q01658 176 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PTPN12Q05209 780 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 GFPT1Q06210 699 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 PPIDQ08752 370 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 MAPK7Q13164 816 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PPP2R5CQ13362 524 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 MSLNQ13421 630 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 MED21Q13503 144 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 UBAP2LQ14157 1087 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 KRT81Q14533 505 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 RRP1BQ14684 758 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 SPCS2Q15005 226 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 VPS72Q15906 364 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 PDK4Q16654 411 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 RTN1Q16799 776 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CLEC16AQ2KHT3 1053 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 KHDC1Q4VXA5 237 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 VWA3BQ502W6 1294 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 KIAA1755Q5JYT7 1200 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TTC38Q5R3I4 469 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ZNF362Q5T0B9 420 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 COL13A1Q5TAT6 717 aaPredicted RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 TMCO4Q5TGY1 634 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 TMEM164Q5U3C3 297 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 FYB2Q5VWT5 728 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ARL6IP4Q66PJ3 421 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 TMEM214Q6NUQ4 689 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 NIPAL1Q6NVV3 410 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 ZNF449Q6P9G9 518 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 AAGABQ6PD74 315 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 KLHL35Q6PF15 583 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 KLHDC10Q6PID8 442 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 DSTYKQ6XUX3 929 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 KYAT3Q6YP21 454 aaKnown RBP2.88□□□□□ -1.95
MDC1-208ENST00000494654 RIPOR1Q6ZS17 1223 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 USP49Q70CQ1 688 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 RAPH1Q70E73 1250 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 CYB5R4Q7L1T6 521 aa2.88□□□□□ -1.95
MDC1-208ENST00000494654 GET4Q7L5D6 327 aaPredicted RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms