RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 ABLIM1O14639 778 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 MEFVO15553 781 aaPredicted RBP10.46□□□□□ -0.73
UBR4-216ENST00000494503 TBCAO75347 108 aaKnown RBP10.46□□□□□ -0.73
UBR4-216ENST00000494503 MICAL2O94851 1124 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 ODC1P11926 461 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 U2AF2P26368 475 aaKnown RBP eCLIP10.46□□□□□ -0.734e-19■□□□□ 9.4
UBR4-216ENST00000494503 GABRR2P28476 465 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 PRPHP41219 470 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 FNTBP49356 437 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 ATXN1P54253 815 aaKnown RBP10.46□□□□□ -0.73
UBR4-216ENST00000494503 ARHGAP8P85298 464 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 MCL1Q07820 350 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 VEPH1Q14D04 833 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 MGAT5BQ3V5L5 792 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 GPR158Q5T848 1215 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 GPBP1Q86WP2 473 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 MAP4K3Q8IVH8 894 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 MFSD6LQ8IWD5 586 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 ATAD1Q8NBU5 361 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 BEST2Q8NFU1 509 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 SPIRE2Q8WWL2 714 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 E2F7Q96AV8 911 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 CALML4Q96GE6 196 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 MMTAG2Q9BU76 263 aaKnown RBP10.46□□□□□ -0.73
UBR4-216ENST00000494503 MSTO1Q9BUK6 570 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 GPR88Q9GZN0 384 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 PLEKHA5Q9HAU0 1116 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 MAFFQ9ULX9 164 aa10.46□□□□□ -0.73
UBR4-216ENST00000494503 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.46□□□□□ -0.73
UBR4-216ENST00000494503 COL4A2P08572 1712 aa10.46□□□□□ -0.74
UBR4-216ENST00000494503 NUP210Q8TEM1 1887 aaPredicted RBP10.46□□□□□ -0.74
UBR4-216ENST00000494503 ACACBO00763 2458 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 SPAG17Q6Q759 2223 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 NCANO14594 1321 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.45□□□□□ -0.74
UBR4-216ENST00000494503 MTMR11A4FU01 709 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 OR6C75A6NL08 312 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 LILRB5O75023 590 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 MOSPD3O75425 235 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 SLC12A3P55017 1021 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 CYP4F8P98187 520 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 SRSF5Q13243 272 aaKnown RBP10.45□□□□□ -0.74
UBR4-216ENST00000494503 FZD5Q13467 585 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 TMEM132DQ14C87 1099 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 PON2Q15165 354 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 SLC39A12Q504Y0 691 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 RILPL1Q5EBL4 403 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 LAIR1Q6GTX8 287 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 JADE1Q6IE81 842 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 Q6ZS52 159 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 ITIH5Q86UX2 942 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 METTL23Q86XA0 190 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 ARID3BQ8IVW6 561 aaPredicted RBP10.45□□□□□ -0.74
UBR4-216ENST00000494503 TTC9BQ8N6N2 239 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 CELF5Q8N6W0 485 aaKnown RBP10.45□□□□□ -0.74
UBR4-216ENST00000494503 SYT2Q8N9I0 419 aaPredicted RBP10.45□□□□□ -0.74
UBR4-216ENST00000494503 CNTNAP3BQ96NU0 1288 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 PNMA5Q96PV4 448 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 TMEM209Q96SK2 561 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 LPIN3Q9BQK8 851 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 REEP2Q9BRK0 252 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 IER2Q9BTL4 223 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 CNTNAP3Q9BZ76 1288 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 CRISPLD1Q9H336 500 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 PARD6AQ9NPB6 346 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.45□□□□□ -0.74
UBR4-216ENST00000494503 GTSE1Q9NYZ3 720 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 SCN1AP35498 2009 aa10.45□□□□□ -0.74
UBR4-216ENST00000494503 TSC2P49815 1807 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 EPG5Q9HCE0 2579 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 TTC26A0AVF1 554 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 SHISA7A6NL88 538 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 SPECC1L-ADORA2AF8WAN1 911 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 M0QZQ0 153 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 PPEF2O14830 753 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 OGTO15294 1046 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 CHADO15335 359 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 OAZ2O95190 189 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 NFICP08651 508 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 LRPAP1P30533 357 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 UBA7P41226 1012 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 ATP2C1P98194 919 aaPredicted RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 DMWDQ09019 674 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 GPR17Q13304 367 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 ENOX2Q16206 610 aaKnown RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 KYAT1Q16773 422 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 C1orf228Q6PIY5 440 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 DNAJB7Q7Z6W7 309 aaPredicted RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 TMC8Q8IU68 726 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 GIPC2Q8TF65 315 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 NOC3LQ8WTT2 800 aaKnown RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 RSPRY1Q96DX4 576 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 SENP8Q96LD8 212 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 PYM1Q9BRP8 204 aaKnown RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 NTPCRQ9BSD7 190 aaKnown RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 RTKNQ9BST9 563 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 OXCT2Q9BYC2 517 aaPredicted RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 HAPLN2Q9GZV7 340 aa10.44□□□□□ -0.74
UBR4-216ENST00000494503 SMG9Q9H0W8 520 aaKnown RBP10.44□□□□□ -0.74
UBR4-216ENST00000494503 DNAJC25Q9H1X3 360 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms