RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 IFNAR1P17181 557 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 CARSP49589 748 aaKnown RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 PCBP4P57723 403 aaKnown RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 SESN2P58004 480 aaPredicted RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 INSM1Q01101 510 aaPredicted RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 CTBSQ01459 385 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 PPARAQ07869 468 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 AIMP1Q12904 312 aaKnown RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 KCNB1Q14721 858 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 MYBPC3Q14896 1274 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 ADIPOQQ15848 244 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 ZNF674Q2M3X9 581 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 KHDC1Q4VXA5 237 aaKnown RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 SLC44A4Q53GD3 710 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 NAA35Q5VZE5 725 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 RRAGBQ5VZM2 374 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 KIAA1841Q6NSI8 718 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 INTS5Q6P9B9 1019 aaKnown RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 IYDQ6PHW0 289 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 ATF7IPQ6VMQ6 1270 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 UNC13DQ70J99 1090 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 NUP54Q7Z3B4 507 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 ANKS1BQ7Z6G8 1248 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 RHOT1Q8IXI2 618 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 SMYD4Q8IYR2 804 aaPredicted RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 USP38Q8NB14 1042 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 ZNF653Q96CK0 615 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 KIF1BPQ96EK5 621 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 MOGAT1Q96PD6 335 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 UIMC1Q96RL1 719 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 ACAT2Q9BWD1 397 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 VPS33BQ9H267 617 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 WDCPQ9H6R7 721 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 RXFP3Q9NSD7 469 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 TDP1Q9NUW8 608 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 TBCCD1Q9NVR7 557 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 RABL2AQ9UBK7 228 aaPredicted RBP7.42□□□□□ -1.22
SNX13-210ENST00000494402 ZNF212Q9UDV6 495 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 SCOCQ9UIL1 159 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 DUSP12Q9UNI6 340 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 PSAT1Q9Y617 370 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 PIAS3Q9Y6X2 628 aa7.42□□□□□ -1.22
SNX13-210ENST00000494402 FMO6PO60774 539 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 GSTM1P09488 218 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 KRT13P13646 458 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 ADSLP30566 484 aaPredicted RBP7.41□□□□□ -1.22
SNX13-210ENST00000494402 KRT2P35908 639 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 EIF2DP41214 584 aaKnown RBP7.41□□□□□ -1.22
SNX13-210ENST00000494402 RGS2P41220 211 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 ARFIP2P53365 341 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 POLR2FP61218 127 aaKnown RBP7.41□□□□□ -1.22
SNX13-210ENST00000494402 CDC42EP1Q00587 391 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 LRRC74AQ0VAA2 488 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 ADAM9Q13443 819 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 LAPTM5Q13571 262 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 GRIK5Q16478 980 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 AOC3Q16853 763 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 PRAMEF14Q5SWL7 426 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 MFSD5Q6N075 450 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 DCLRE1AQ6PJP8 1040 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 NFXL1Q6ZNB6 911 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 NLRP10Q86W26 655 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 CPNE8Q86YQ8 564 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 KIAA2013Q8IYS2 634 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 CELF5Q8N6W0 485 aaKnown RBP7.41□□□□□ -1.22
SNX13-210ENST00000494402 ZNF655Q8N720 491 aaPredicted RBP7.41□□□□□ -1.22
SNX13-210ENST00000494402 VGLL2Q8N8G2 317 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 KCNG4Q8TDN1 519 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 CSGALNACT1Q8TDX6 532 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 NUDT8Q8WV74 236 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 RBM18Q96H35 190 aaKnown RBP7.41□□□□□ -1.22
SNX13-210ENST00000494402 TRAPPC9Q96Q05 1148 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 OSBPL6Q9BZF3 934 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 INTS10Q9NVR2 710 aaKnown RBP7.41□□□□□ -1.22
SNX13-210ENST00000494402 PCDHA1Q9Y5I3 950 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 LYVE1Q9Y5Y7 322 aa7.41□□□□□ -1.22
SNX13-210ENST00000494402 TM4SF5O14894 197 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 AKR1B10O60218 316 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 TBC1D4O60343 1298 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 BUB1BO60566 1050 aaPredicted RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 ADH5P11766 374 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 TBXAS1P24557 533 aaPredicted RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 PSMC2P35998 433 aaKnown RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 THPOP40225 353 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 ZNF41P51814 821 aaPredicted RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 RARSP54136 660 aaKnown RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 RAC1P63000 192 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 NOMO1Q15155 1222 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 SEC23BQ15437 767 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 TCP11X2Q5H9J9 407 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 FYB2Q5VWT5 728 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 CRTC1Q6UUV9 634 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 FAM180AQ6UWF9 173 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 H1FNTQ75WM6 255 aaPredicted RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 CEP68Q76N32 757 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 RAB11FIP4Q86YS3 637 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 C17orf53Q8N3J3 647 aaPredicted RBP7.4□□□□□ -1.22
SNX13-210ENST00000494402 DAGLBQ8NCG7 672 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 OR1N1Q8NGS0 311 aa7.4□□□□□ -1.22
SNX13-210ENST00000494402 OR2I1PQ8NGU4 316 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms