RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 SV2CQ496J9 727 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 WSCD1Q658N2 575 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 CYP26C1Q6V0L0 522 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 ZDHHC14Q8IZN3 488 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 CSGALNACT2Q8N6G5 542 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 XXYLT1Q8NBI6 393 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 OR10T2Q8NGX3 314 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 ITFG1Q8TB96 612 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 CACTINQ8WUQ7 758 aaKnown RBP15.86■□□□□ 0.13
ATG4B-224ENST00000494132 RSAD2Q8WXG1 361 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 ING5Q8WYH8 240 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 CCDC127Q96BQ5 260 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 BORCS6Q96GS4 357 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 ZNF560Q96MR9 790 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 RHOBTB2Q9BYZ6 727 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 CRISPLD1Q9H336 500 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 INTS13Q9NVM9 706 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 MAPK8IP1Q9UQF2 711 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 INSL5Q9Y5Q6 135 aa15.86■□□□□ 0.13
ATG4B-224ENST00000494132 KMT2EQ8IZD2 1858 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 KPNA7A9QM74 516 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 FSHRP23945 695 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 HOXA9P31269 272 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 CASP4P49662 377 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 PNOCQ13519 176 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 TRIM67Q6ZTA4 783 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 PLCD3Q8N3E9 789 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 TTC9BQ8N6N2 239 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 CXorf38Q8TB03 319 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 ERCC4Q92889 916 aaPredicted RBP15.85■□□□□ 0.13
ATG4B-224ENST00000494132 ANKRD36BP1Q96IX9 119 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 RTP3Q9BQQ7 232 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 AFF4Q9UHB7 1163 aaKnown RBP15.85■□□□□ 0.13
ATG4B-224ENST00000494132 SIX4Q9UIU6 781 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 SORCS3Q9UPU3 1222 aa15.85■□□□□ 0.13
ATG4B-224ENST00000494132 ZNF318Q5VUA4 2279 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 DENND4CQ5VZ89 1909 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 ZNF638Q14966 1978 aaKnown RBP15.84■□□□□ 0.13
ATG4B-224ENST00000494132 EXOC3O60645 756 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 SOAT2O75908 522 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 TNNC2P02585 160 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 MYL1P05976 194 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 TNNI1P19237 187 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 CYP24A1Q07973 514 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 TWF1Q12792 350 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 DUSP4Q13115 394 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 PSMD2Q13200 908 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 SLC5A9Q2M3M2 681 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 PABPC1LQ4VXU2 614 aaKnown RBP15.84■□□□□ 0.13
ATG4B-224ENST00000494132 TPGS2Q68CL5 300 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 HFE2Q6ZVN8 426 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 TCEAL8Q8IYN2 117 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 SMYD4Q8IYR2 804 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-224ENST00000494132 FMR1NBQ8N0W7 255 aaPredicted RBP15.84■□□□□ 0.13
ATG4B-224ENST00000494132 ATAD1Q8NBU5 361 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 PLEKHO2Q8TD55 490 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 CORO1BQ9BR76 489 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 KCTD10Q9H3F6 313 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 KCNK12Q9HB15 430 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 KIAA1586Q9HCI6 787 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 ITGA11Q9UKX5 1188 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 L1RE1Q9UN81 338 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 SLC27A5Q9Y2P5 690 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 YIPF1Q9Y548 306 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 TRIOO75962 3097 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 OBSL1O75147 1896 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 PTPRDP23468 1912 aa15.84■□□□□ 0.13
ATG4B-224ENST00000494132 ARHGEF37A1IGU5 675 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 MTMR11A4FU01 709 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 TMEM221A6NGB7 291 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 OR6C75A6NL08 312 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 PRR33A8MZF0 331 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 M0R296 226 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 NRG2O14511 850 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-224ENST00000494132 HCRTO43612 131 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 NARSO43776 548 aaKnown RBP15.83■□□□□ 0.12
ATG4B-224ENST00000494132 RHOBTB3O94955 611 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 PDGFBP01127 241 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-224ENST00000494132 CYP11A1P05108 521 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 RHOP08100 348 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 LAMP2P13473 410 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 RBP5P82980 135 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 SIGLEC14Q08ET2 396 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 GPR17Q13304 367 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 SNW1Q13573 536 aaKnown RBP15.83■□□□□ 0.12
ATG4B-224ENST00000494132 MTMR3Q13615 1198 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 SLC39A12Q504Y0 691 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 OSTM1Q86WC4 334 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 METTL23Q86XA0 190 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 HS6ST3Q8IZP7 471 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 CCDC47Q96A33 483 aaKnown RBP15.83■□□□□ 0.12
ATG4B-224ENST00000494132 FNBP1Q96RU3 617 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 GZF1Q9H116 711 aaPredicted RBP15.83■□□□□ 0.12
ATG4B-224ENST00000494132 CEP72Q9P209 647 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 SNX9Q9Y5X1 595 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 MYH10P35580 1976 aa15.83■□□□□ 0.12
ATG4B-224ENST00000494132 ZDBF2Q9HCK1 2354 aa15.82■□□□□ 0.12
ATG4B-224ENST00000494132 GADD45BO75293 160 aaPredicted RBP15.82■□□□□ 0.12
ATG4B-224ENST00000494132 ACAT1P24752 427 aaKnown RBP15.82■□□□□ 0.12
ATG4B-224ENST00000494132 PNPLA4P41247 253 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms