RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 LRMPQ12912 555 aa15.62■□□□□ 0.09
BRCA1-223ENST00000494123 GRIN2CQ14957 1233 aa15.62■□□□□ 0.09
BRCA1-223ENST00000494123 EXOC3L4Q17RC7 722 aa15.62■□□□□ 0.09
BRCA1-223ENST00000494123 RTP2Q5QGT7 225 aa15.62■□□□□ 0.09
BRCA1-223ENST00000494123 EHBP1Q8NDI1 1231 aa15.62■□□□□ 0.09
BRCA1-223ENST00000494123 RIN2Q8WYP3 895 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-223ENST00000494123 INTS2Q9H0H0 1204 aaKnown RBP15.62■□□□□ 0.09
BRCA1-223ENST00000494123 ZBP1Q9H171 429 aa15.62■□□□□ 0.09
BRCA1-223ENST00000494123 MRPL17Q9NRX2 175 aaKnown RBP15.62■□□□□ 0.09
BRCA1-223ENST00000494123 SSX2IPQ9Y2D8 614 aa15.62■□□□□ 0.09
BRCA1-223ENST00000494123 TIMM13Q9Y5L4 95 aaPredicted RBP15.62■□□□□ 0.09
BRCA1-223ENST00000494123 VWA8A3KMH1 1905 aa15.62■□□□□ 0.09
BRCA1-223ENST00000494123 LRRC10BA6NIK2 292 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 LGALS16A8MUM7 142 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 LRRN2O75325 713 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 CTSAP10619 480 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 ERVFC1P60507 584 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 FANCCQ00597 558 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 DSG1Q02413 1049 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 UBXN1Q04323 297 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 YWHAHQ04917 246 aaPredicted RBP15.61■□□□□ 0.09
BRCA1-223ENST00000494123 SMC1AQ14683 1233 aaKnown RBP15.61■□□□□ 0.09
BRCA1-223ENST00000494123 PLPP4Q5VZY2 271 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 PDXDC1Q6P996 788 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 SCARA5Q6ZMJ2 495 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 TOP6BLQ8N6T0 577 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 NT5C1BQ96P26 610 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 NIF3L1Q9GZT8 377 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 NGRNQ9NPE2 291 aaKnown RBP15.61■□□□□ 0.09
BRCA1-223ENST00000494123 CHST7Q9NS84 486 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 L1RE1Q9UN81 338 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 POLIQ9UNA4 740 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 MYO9BQ13459 2157 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.61■□□□□ 0.09
BRCA1-223ENST00000494123 CXCL14O95715 111 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 TYMPP19971 482 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 TSC2P49815 1807 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 VARS2Q5ST30 1063 aaKnown RBP15.61■□□□□ 0.09
BRCA1-223ENST00000494123 OVOS1Q6IE37 1185 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 PDE12Q6L8Q7 609 aaKnown RBP15.61■□□□□ 0.09
BRCA1-223ENST00000494123 ANKS3Q6ZW76 656 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 DPH6Q7L8W6 267 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 GAS2L3Q86XJ1 694 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 ADGRF2Q8IZF7 708 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 TMEM86AQ8N2M4 240 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 PDCL2Q8N4E4 241 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 AUTS2Q8WXX7 1259 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 RBSNQ9H1K0 784 aa15.61■□□□□ 0.09
BRCA1-223ENST00000494123 APOBEC3GQ9HC16 384 aaKnown RBP15.61■□□□□ 0.09
BRCA1-223ENST00000494123 H7C4K7 107 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 CYP11A1P05108 521 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 CREMQ03060 361 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 PTPN14Q15678 1187 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 PSMD5Q16401 504 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 SOWAHAQ2M3V2 549 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 WSCD1Q658N2 575 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 ZNF280DQ6N043 979 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 PRSS55Q6UWB4 352 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-223ENST00000494123 APTXQ7Z2E3 356 aaKnown RBP15.6■□□□□ 0.09
BRCA1-223ENST00000494123 THEM5Q8N1Q8 247 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 LMO3Q8TAP4 145 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 PIK3R5Q8WYR1 880 aa15.6■□□□□ 0.09
BRCA1-223ENST00000494123 MRPL38Q96DV4 380 aaKnown RBP15.6■□□□□ 0.09
BRCA1-223ENST00000494123 PCMTD1Q96MG8 357 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-223ENST00000494123 GAS2L1Q99501 681 aaPredicted RBP15.6■□□□□ 0.09
BRCA1-223ENST00000494123 FSCN2O14926 492 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 SLC9A1P19634 815 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 IRS1P35568 1242 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 ASPAP45381 313 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 FXR1P51114 621 aaKnown RBP eCLIP15.59■□□□□ 0.09
BRCA1-223ENST00000494123 UBASH3AP57075 661 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 PLCB2Q00722 1185 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 CAMK1Q14012 370 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 CTXN3Q4LDR2 81 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 KIAA0319Q5VV43 1072 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 TRIM65Q6PJ69 517 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 Q7L0L9 218 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 PPM1KQ8N3J5 372 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 DEFB123Q8N688 67 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 TATDN2Q93075 761 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 FAXDC2Q96IV6 333 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 EMILIN2Q9BXX0 1053 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 SNX25Q9H3E2 840 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 SMYD3Q9H7B4 428 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 RTN4Q9NQC3 1192 aaKnown RBP15.59■□□□□ 0.09
BRCA1-223ENST00000494123 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.59■□□□□ 0.09
BRCA1-223ENST00000494123 CHD7Q9P2D1 2997 aa15.59■□□□□ 0.09
BRCA1-223ENST00000494123 A0A1B0GTH6 734 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 TACC1O75410 805 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 OAZ2O95190 189 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 TPM3P06753 285 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 IGFBP4P22692 258 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 TBXAS1P24557 533 aaPredicted RBP15.58■□□□□ 0.09
BRCA1-223ENST00000494123 PON1P27169 355 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 RAP1GAPP47736 663 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 LHX1P48742 406 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 GPR65Q8IYL9 337 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 MRPL43Q8N983 215 aaKnown RBP15.58■□□□□ 0.09
BRCA1-223ENST00000494123 OR6B3Q8NGW1 331 aa15.58■□□□□ 0.09
BRCA1-223ENST00000494123 LNX1Q8TBB1 728 aaPredicted RBP15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms