RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 SHCBP1Q8NEM2 672 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 KAT2BQ92831 832 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 TSR2Q969E8 191 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 PPP1R13BQ96KQ4 1090 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 C16orf92Q96LL3 132 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 LLPHQ9BRT6 129 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 MTG2Q9H4K7 406 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 FANCLQ9NW38 375 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 L1RE1Q9UN81 338 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 SLC30A1Q9Y6M5 507 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 V9GYY5 206 aaPredicted RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 WDR33Q9C0J8 1336 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 TNRQ92752 1358 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 CBX4O00257 560 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 DHX16O60231 1041 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 STC2O76061 302 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 ATP2A2P16615 1042 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 ARHGAP25P42331 645 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 GRM7Q14831 915 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZC3H12BQ5HYM0 836 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 NAA16Q6N069 864 aaPredicted RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 DDX53Q86TM3 631 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 NCSTNQ92542 709 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 FAM126AQ9BYI3 521 aaPredicted RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 CHMP4BQ9H444 224 aaKnown RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 NAP1L2Q9ULW6 460 aaPredicted RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 CTDP1Q9Y5B0 961 aaPredicted RBP2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 BRWD3Q6RI45 1802 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 MROH7-TTC4A0A0A0MT08 1334 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 SPATA31A3Q5VYP0 1347 aa2.91□□□□□ -1.94
CDC42EP3-205ENST00000494083 SYCE3A1L190 88 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 IFIT2P09913 472 aaKnown RBP2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 SYT1P21579 422 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 ECHS1P30084 290 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 AMPD3Q01432 767 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 TRDNQ13061 729 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 NFYCQ13952 458 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 KRT24Q2M2I5 525 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 CFAP100Q494V2 611 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 LACTB2Q53H82 288 aaPredicted RBP2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 BEND3Q5T5X7 828 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 AMOTL1Q8IY63 956 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 C3orf20Q8ND61 904 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 PGBD4Q96DM1 585 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 MYL10Q9BUA6 226 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 USP44Q9H0E7 712 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 DONSONQ9NYP3 566 aa2.9□□□□□ -1.94
CDC42EP3-205ENST00000494083 ANKRD36A6QL64 1941 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 UBA6A0AVT1 1052 aaPredicted RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 EFCAB8A8MWE9 144 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 TOX4O94842 621 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 PTTG1IPP53801 180 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 ADAM8P78325 824 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 CDK17Q00537 523 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 ICA1Q05084 483 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 PCBP1Q15365 356 aaKnown RBP eCLIP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 GOLGA5Q8TBA6 731 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 MORC4Q8TE76 937 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZNF496Q96IT1 587 aaPredicted RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 CDK5RAP1Q96SZ6 601 aaKnown RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 FOXB1Q99853 325 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 API5Q9BZZ5 524 aaKnown RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 MTFR1LQ9H019 292 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 PCDH12Q9NPG4 1184 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 OXSMQ9NWU1 459 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 FBXO10Q9UK96 956 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 A0A1W2PRX2 142 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 TARSL2A2RTX5 802 aaKnown RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 LIN7AO14910 233 aaPredicted RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 MAP4K4O95819 1239 aaPredicted RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 ASLP04424 464 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 HNRNPH3P31942 346 aaKnown RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 ACVRL1P37023 503 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 NOVP48745 357 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 PDIA5Q14554 519 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 WDR43Q15061 677 aaKnown RBP eCLIP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 MAP9Q49MG5 647 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 CAVIN1Q6NZI2 390 aaKnown RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 Q6ZRM9 215 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 C1orf210Q8IVY1 113 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 C16orf71Q8IYS4 520 aaPredicted RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 WDR48Q8TAF3 677 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 AENQ8WTP8 325 aaKnown RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 NKD2Q969F2 451 aaPredicted RBP2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 PLEKHG4BQ96PX9 1271 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 TUBGCP5Q96RT8 1024 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZNF341Q9BYN7 854 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 UBA5Q9GZZ9 404 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 CCDC134Q9H6E4 229 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 ZMAT4Q9H898 229 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 RAI14Q9P0K7 980 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 DENND2AQ9ULE3 1009 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 MAP3K19Q56UN5 1328 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 SPATA31A1Q5TZJ5 1347 aa2.9□□□□□ -1.95
CDC42EP3-205ENST00000494083 hCG_2014768A0A024R1R8 64 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 H0YGN5 161 aa2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 KIF1CO43896 1103 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 FDPSP14324 419 aaKnown RBP2.89□□□□□ -1.95
CDC42EP3-205ENST00000494083 HIBADHP31937 336 aaKnown RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms