RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ZSCAN22P10073 491 aaPredicted RBP9.25□□□□□ -0.93
LRCH3-219ENST00000494069 CPB1P15086 417 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 GAP43P17677 238 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 PTPN2P17706 415 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 SCP2P22307 547 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 CLCN5P51795 746 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 PTPN5P54829 565 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 DUSP4Q13115 394 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 TMEM132DQ14C87 1099 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 PRSS36Q5K4E3 855 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 TPGS2Q68CL5 300 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 SLFN12LQ6IEE8 588 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 CD302Q8IX05 232 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 TCEAL8Q8IYN2 117 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 ATAD1Q8NBU5 361 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 OR10T2Q8NGX3 314 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 NXPE3Q969Y0 559 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 BORCS6Q96GS4 357 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 ZSWIM3Q96MP5 696 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 ZNF396Q96N95 335 aaPredicted RBP9.25□□□□□ -0.93
LRCH3-219ENST00000494069 ACCSQ96QU6 501 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 RTP3Q9BQQ7 232 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 CBWD1Q9BRT8 395 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 PCIF1Q9H4Z3 704 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 RYDENQ9NUL5 291 aaKnown RBP9.25□□□□□ -0.93
LRCH3-219ENST00000494069 SEL1LQ9UBV2 794 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 WNT16Q9UBV4 365 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 KCNH3Q9ULD8 1083 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 SLC27A5Q9Y2P5 690 aa9.25□□□□□ -0.93
LRCH3-219ENST00000494069 XPOTO43592 962 aaKnown RBP9.24□□□□□ -0.93
LRCH3-219ENST00000494069 CUTAO60888 179 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 LRRN2O75325 713 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 YEATS4O95619 227 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 F13A1P00488 732 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 AOC1P19801 751 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 HOXD13P35453 343 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 TANGO2Q6ICL3 276 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 OVOS1Q6IE37 1185 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 RTL10Q7L3V2 364 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 USP37Q86T82 979 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 SYCP3Q8IZU3 236 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 NOC3LQ8WTT2 800 aaKnown RBP9.24□□□□□ -0.93
LRCH3-219ENST00000494069 HVCN1Q96D96 273 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 TSPAN18Q96SJ8 248 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 PRRX2Q99811 253 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 TRIM9Q9C026 710 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 DNAJC25Q9H1X3 360 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 ASB7Q9H672 318 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 TBC1D17Q9HA65 648 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 SLC2A4RGQ9NR83 387 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 OLFML3Q9NRN5 406 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 KBTBD4Q9NVX7 518 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 DPP3Q9NY33 737 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 PCDHA7Q9UN72 937 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 DERAQ9Y315 318 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 YIPF1Q9Y548 306 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 ZFP37Q9Y6Q3 630 aaPredicted RBP9.24□□□□□ -0.93
LRCH3-219ENST00000494069 SCN1AP35498 2009 aa9.24□□□□□ -0.93
LRCH3-219ENST00000494069 ANK1P16157 1881 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 MTMR11A4FU01 709 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 OR6C75A6NL08 312 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 CYB561D2O14569 222 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 POLR2DO15514 142 aaKnown RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 DCNP07585 359 aaKnown RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 HSP90AA1P07900 732 aaKnown RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 ODC1P11926 461 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 MYL4P12829 197 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 PRKCSHP14314 528 aaPredicted RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 TYMPP19971 482 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 FCARP24071 287 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 ABCD1P33897 745 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 TFAMQ00059 246 aaKnown RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 DNM1Q05193 864 aaKnown RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 GPR17Q13304 367 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 SNW1Q13573 536 aaKnown RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 POSTNQ15063 836 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 FAM78AQ5JUQ0 283 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 WSCD1Q658N2 575 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 LMBRD2Q68DH5 695 aaPredicted RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 CENPPQ6IPU0 288 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 PDZD4Q76G19 769 aaPredicted RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 LRRTM3Q86VH5 581 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 GPIHBP1Q8IV16 184 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 BRSK2Q8IWQ3 736 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 CCDC65Q8IXS2 484 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 GRAMD1CQ8IYS0 662 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 C1orf127Q8N9H9 656 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 DTWD2Q8NBA8 298 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 ATOH1Q92858 354 aaPredicted RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 ZNF512Q96ME7 567 aaPredicted RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 PYM1Q9BRP8 204 aaKnown RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 LRRC3Q9BY71 257 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 FOXQ1Q9C009 403 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 BLZF1Q9H2G9 400 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 TNMDQ9H2S6 317 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 PDE11AQ9HCR9 933 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 AVENQ9NQS1 362 aaPredicted RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 ARHGEF3Q9NR81 526 aa9.23□□□□□ -0.93
LRCH3-219ENST00000494069 RBAKQ9NYW8 714 aaPredicted RBP9.23□□□□□ -0.93
LRCH3-219ENST00000494069 EXOC7Q9UPT5 735 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms