RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 CARSP49589 748 aaKnown RBP11.34□□□□□ -0.59
CLCN6-208ENST00000494028 CPT1AP50416 773 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 BEX3Q00994 111 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 TMEM62Q0P6H9 643 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 SREBF2Q12772 1141 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 CLUL1Q15846 466 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 C2CD6Q53TS8 623 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 IFT20Q8IY31 132 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 TSEN2Q8NCE0 465 aaKnown RBP11.34□□□□□ -0.59
CLCN6-208ENST00000494028 TRPV1Q8NER1 839 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 ZNF606Q8WXB4 792 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 NAP1L3Q99457 506 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-208ENST00000494028 ADPGKQ9BRR6 497 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 GCOM2Q9BZD3 368 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-208ENST00000494028 ZFYVE28Q9HCC9 887 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 EPB41L5Q9HCM4 733 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLCN6-208ENST00000494028 ADAM22Q9P0K1 906 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 ITGA11Q9UKX5 1188 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 PCDHA3Q9Y5H8 950 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 SCINQ9Y6U3 715 aa11.34□□□□□ -0.59
CLCN6-208ENST00000494028 GOLGA6L10A0A0M3HER8 536 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 A0A0U1RQG5 324 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-208ENST00000494028 MYADML2A6NDP7 307 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 SART1O43290 800 aaKnown RBP11.33□□□□□ -0.6
CLCN6-208ENST00000494028 CILPO75339 1184 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 GJB6O95452 261 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 CALB1P05937 261 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 CYBAP13498 195 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 ATICP31939 592 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 MAN1A1P33908 653 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 RAD23BP54727 409 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 HTRA3P83110 453 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 ZNF252P-AS1Q0IIN9 211 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 SIX1Q15475 284 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-208ENST00000494028 ZNF394Q53GI3 561 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 DENND1BQ6P3S1 775 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 CATSPER4Q7RTX7 472 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 PHLDB2Q86SQ0 1253 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 NT5DC4Q86YG4 428 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 PRELID2Q8N945 189 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 VCPIP1Q96JH7 1222 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 GDAP1L1Q96MZ0 367 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 TWNKQ96RR1 684 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 HINFPQ9BQA5 517 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 TRIM51Q9BSJ1 452 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 KATNAL1Q9BW62 490 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 EIF2AQ9BY44 585 aaKnown RBP11.33□□□□□ -0.6
CLCN6-208ENST00000494028 ELOVL4Q9GZR5 314 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 ACBD3Q9H3P7 528 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 CDHR5Q9HBB8 845 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 NXF1Q9UBU9 619 aaKnown RBP11.33□□□□□ -0.6
CLCN6-208ENST00000494028 NFU1Q9UMS0 254 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 Q9Y3F1 56 aa11.33□□□□□ -0.6
CLCN6-208ENST00000494028 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 TTI1O43156 1089 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 TREHO43280 583 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 PSTPIP1O43586 416 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 PAEPP09466 180 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 FAM153BP0C7A2 387 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 PYGMP11217 842 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 AKR1A1P14550 325 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 HOXA11P31270 313 aaPredicted RBP11.32□□□□□ -0.6
CLCN6-208ENST00000494028 SLC1A1P43005 524 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 APLP1P51693 650 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 GSCP56915 257 aaPredicted RBP11.32□□□□□ -0.6
CLCN6-208ENST00000494028 RWDD2BP57060 319 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 PURAQ00577 322 aaKnown RBP11.32□□□□□ -0.6
CLCN6-208ENST00000494028 INCA1Q0VD86 236 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 MAMLD1Q13495 774 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 SNX17Q15036 470 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 PPP2R5EQ16537 467 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 CYP1B1Q16678 543 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 FAM153CQ494X1 144 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 PTPN20Q4JDL3 420 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 PPP1R15BQ5SWA1 713 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 SLC27A1Q6PCB7 646 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 APBB1IPQ7Z5R6 666 aaPredicted RBP11.32□□□□□ -0.6
CLCN6-208ENST00000494028 SLC13A5Q86YT5 568 aaPredicted RBP11.32□□□□□ -0.6
CLCN6-208ENST00000494028 CD302Q8IX05 232 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 ZDHHC14Q8IZN3 488 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 MREGQ8N565 214 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 EIF1ADQ8N9N8 165 aaKnown RBP11.32□□□□□ -0.6
CLCN6-208ENST00000494028 C12orf50Q8NA57 414 aaPredicted RBP11.32□□□□□ -0.6
CLCN6-208ENST00000494028 SLC4A11Q8NBS3 891 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 TMEM35BQ8NCS4 154 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 TMEM40Q8WWA1 233 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 SEC14L1Q92503 715 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 KIF12Q96FN5 646 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 DDX27Q96GQ7 796 aaKnown RBP11.32□□□□□ -0.6
CLCN6-208ENST00000494028 ACAP3Q96P50 834 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 CELF4Q9BZC1 486 aaKnown RBP11.32□□□□□ -0.6
CLCN6-208ENST00000494028 AP5M1Q9H0R1 490 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 NEUROG2Q9H2A3 272 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 CXCL16Q9H2A7 254 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 NXF3Q9H4D5 531 aaKnown RBP11.32□□□□□ -0.6
CLCN6-208ENST00000494028 CYP3A43Q9HB55 503 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 TUBGCP4Q9UGJ1 667 aa11.32□□□□□ -0.6
CLCN6-208ENST00000494028 AMACRQ9UHK6 382 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms